Showing 94 open source projects for "data science"

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  • 1
    DataQualityDashboard

    DataQualityDashboard

    A tool to help improve data quality standards in data science

    The goal of the Data Quality Dashboard (DQD) project is to design and develop an open-source tool to expose and evaluate observational data quality. This package will run a series of data quality checks against an OMOP CDM instance (currently supports v5.4, v5.3 and v5.2). It systematically runs the checks, evaluates the checks against some pre-specified threshold, and then communicates what was done in a transparent and easily understandable way. The quality checks were organized according...
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  • 2
    MathMod

    MathMod

    MathMod is a mathematical modeling software

    MathMod is a portable interactive plotting and graphing program for Windows, Linux, MacOSX and many other platforms. MathMod allows to plot 3D mathematical surfaces, described by implicit or parametric equations, and offers a very large database of model samples that can be generated with it. It's Free and Open Source. Change-log for MathMod-13.0 (15/11/2025) 1) Scripts generator to add thickness to iso/parametric surfaces 2) Undo/Redo commands for navigating through previous...
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    Downloads: 18 This Week
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  • 3
    Jmol

    Jmol

    An interactive viewer for three-dimensional chemical structures.

    Over 1,000,000 page views per month. Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other...
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    Downloads: 465 This Week
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  • 4
    QUAST

    QUAST

    Quality Assessment Tool for Genome Assemblies

    QUAST performs fast and convenient quality evaluation and comparison of genome assemblies. It is maintained by the Gurevich lab at HIPS (https://helmholtz-hips.de/en/hmsb). For the most up-to-date description, please visit http://quast.sf.net. Below are just some highlights. QUAST computes several well-known metrics, including contig accuracy, the number of genes discovered, N50, and others, as well as introducing new ones, like NA50 (see details in the paper and manual). A...
    Downloads: 14 This Week
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    PlateEditor

    PlateEditor

    PlateEditor, a free web application to work with multi-well plates

    PlateEditor is a free web application to work with multi-well plates, from creation of layouts to data visualization and aggregation. It is primarily designed as a tool to help scientists working in the field of biology to simplify and fasten the process of data analysis. It is fully client-side: files are never transferred to the server, ensuring complete security and privacy of research data. It doesn't require any installation. - PlateEditor is available at this...
    Downloads: 0 This Week
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  • 6
    Stud.IP ist ein Lern- und Informations-Management-System für Hochschulen, Bildungseinrichtungen und Unternehmen. Professioneller Support und Auftragsentwicklung wird durch data-quest (www.data-quest.de) angeboten.
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    Downloads: 3 This Week
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  • 7
    OpenClinic GA

    OpenClinic GA

    Open Source Integrated Hospital Information Management System

    OpenClinic GA is an open source integrated hospital information management system covering management of administrative, financial, clinical, lab, x-ray, pharmacy, meals distribution and other data. Extensive statistical and reporting capabilities. OpenClinic GA and OpenClinic GMAO are owned by Frank Verbeke, MD, PhD at Post-Factum BV (https://www.post-factum.be)
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    Downloads: 157 This Week
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  • 8
    Huygens Remote Manager
    The Huygens Remote Manager is an open-source, efficient, multi-user web-based interface to the Huygens software by Scientific Volume Imaging (http://www.svi.nl/) for parallel batch deconvolutions.
    Downloads: 1 This Week
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  • 9
    AlphaPlot

    AlphaPlot

    Interactive scientific graphing and data analysis software.

    Alpha Plot can generate different types of 2D and 3D plots (such as line, scatter, bar, pie, and surface plots) from data that is either imported from ASCII files, entered by hand, or calculated using formulas. The data is held in spreadsheets which are referred to as tables with column-based data (typically X and Y values for 2D plots) or matrices (for 3D plots). The spreadsheets as well as graphs and note windows are gathered in a project and can be organized using folders. The built-in...
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    Downloads: 27 This Week
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  • 10
    Downloads: 0 This Week
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  • 11
    Nexplorer is a web-based phylogenetic browser, used to view and edit comparative data, and ideal for creating publication-quality views in which the tips of a tree are aligned with the rows of a character matrix (e.g., a sequence alignment).
    Downloads: 0 This Week
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  • 12
    Data Science at the Command Line

    Data Science at the Command Line

    Data science at the command line

    Command Line by Jeroen Janssens, published by O’Reilly Media in October 2021. Obtain, scrub, explore, and model data with Unix Power Tools. This repository contains the full text, data, and scripts used in the second edition of the book Data Science at the Command Line by Jeroen Janssens. This thoroughly revised guide demonstrates how the flexibility of the command line can help you become a more efficient and productive data scientist. You’ll learn how to combine small yet powerful command-line tools to quickly obtain, scrub, explore, and model your data. ...
    Downloads: 0 This Week
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  • 13
    istSOS

    istSOS

    Free and Open Source Sensor Observation Service Data Management System

    istSOS is an OGC SOS server implementation written in Python. istSOS allows for managing and dispatch observations from monitoring sensors according to the Sensor Observation Service standard. The project provides also a Graphical user Interface that allows for easing the daily operations and a RESTful Web api for automatizing administration procedures. istSOS is released under the GPL License, and runs on all major platforms (Windows, Linux, Mac OS X), even though tests were conducted...
    Downloads: 6 This Week
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  • 14
    geoStarsLib  - geodetic library

    geoStarsLib - geodetic library

    Geodesy based library (geodetic and geocentric functions)

    geoStarsLib has functions for dealing with many geodesy-based problems found in positioning, pointing, and surveying situations. It is useful to determine absolute position on the earth, pointing vectors, coordinate transformations, and other functions.
    Downloads: 4 This Week
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  • 15
    CueMol

    CueMol

    CueMol - Molecular Visualization Framework

    CueMol - Molecular Visualization Framework based on OpenGL, Mozilla XULRunner, and javascript
    Downloads: 2 This Week
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  • 16
    DICOM Image Reader

    DICOM Image Reader

    A minimal Medical application to read and view DICOM (dcm) image file

    Dicom Image Reader is opensource medical image viewer built with JavaScript, HTML5, NodeJS and Electron framework. It can load data in DICOM format (single image dcm) and provides standard tools for its manipulation such as contrast, zoom, drag, possibility to draw regions on top of the image and imaging filters such as threshold and sharpening. It is based DWV JavaScript opensource library. =============== Requirements: - Processor: Intel Pentium 4 processor or later that's SSE2...
    Downloads: 14 This Week
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  • 17
    TWiki Enterprise Collaboration Platform

    TWiki Enterprise Collaboration Platform

    Open Source Enterprise Wiki and Web Application Platform

    Enterprise collaboration platform with over 400 extensions. Users without programming skills can create web applications. 50,000 small businesses, many Fortune 500 companies, and millions of people use TWiki, with installations of 100,000s of pages. Visit http://twiki.org/ for the open source TWiki. The TWiki community is focusing on building the best collaboration platform for the workplace. We invite you to GET INVOLVED! More at http://bit.ly/twGetInv.
    Downloads: 13 This Week
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  • 18
    x-ballistics

    x-ballistics

    a browser based ballistics calculator for arrows and bullets

    Browser based ballistics calculator for arrows and bullets: http://www.x-ballistics.eu/app/web/ballistics/index
    Downloads: 0 This Week
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  • 19
    Spark Notebook

    Spark Notebook

    Interactive and Reactive Data Science using Scala and Spark

    Spark Notebook is an interactive web-based computational notebook designed to make working with Apache Spark more productive, exploratory, and expressive. It allows developers, data scientists, and analysts to write, run, and visualize Spark code in cells that support multiple languages such as Scala, Python, and SQL, all within the same notebook. Users can interleave runnable code, rich text markup, visualizations, equations, and results, enabling reproducible research and exploratory data...
    Downloads: 0 This Week
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  • 20
    Bibliograph

    Bibliograph

    Open Source Online Bibliographic Data Management

    Bibliograph is a powerful and intuitive open source web application for the collaborative collection, editing and publishing of bibliographic data such as a bibliographies, small library collections or shared research data. It features a modern user interface similar to a desktop application.
    Downloads: 0 This Week
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  • 21
    SWordy

    SWordy

    An Office add-in which allows data import from Stata into Word

    SWordy is an Office add-in which allows data import from Stata into a Microsoft Word document. SWordy can also create automatic documents, namely Word documents which can automatically update their data by retrieving it from Stata.
    Downloads: 0 This Week
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  • 22
    Rodeo

    Rodeo

    A data science IDE for Python

    A data science IDE for Python. RODEO, that is an open-source python IDE and has been brought up by the folks at yhat, is a development environment that is lightweight, intuitive and yet customizable to its very core and also contains all the features mentioned above that were searched for so long. It is just like your very own personal home base for exploration and interpretation of data that aims at Data Scientists and answers the main question, "Is there anything like RStudio for Python?" ...
    Downloads: 3 This Week
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  • 23
    ZENBU is a data integration, data processing, and visualization web system based around three main web interfaces : an expression data enhanced genome browser interface, a secured user system for data upload and secured data sharing, and a data explorer interface to find and manipulate data across the many supported experimental data types and to find shared user configurations ZENBU is built as a web2.0 client/server application with javascript web clients and c++ server infrastructure.
    Downloads: 0 This Week
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  • 24
    AXYZ

    AXYZ

    Newsfeed aggregator

    The article explains the design and the characteristics of a new open source content aggregation system. Among the features of the program, stands out a new processing engine of syndication channels, monitoring capability of information recovery in real time, the possibilities of the configuration of aggregator behavior, automatic classification of contents and new models for representation of information from relational interactive maps. On the other hand, the aggregation program, which...
    Downloads: 0 This Week
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  • 25
    Data Science Specialization

    Data Science Specialization

    Course materials for the Data Science Specialization on Coursera

    The Data Science Specialization Courses repository is a collection of materials that support the Johns Hopkins University Data Science Specialization on Coursera. It contains the source code and resources used throughout the specialization’s courses, covering a broad range of data science concepts and techniques. The repository is designed as a shared space for code examples, datasets, and instructional materials, helping learners follow along with lectures and assignments. ...
    Downloads: 1 This Week
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