47 projects for "sam" with 1 filter applied:

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  • 1
    SAM 3

    SAM 3

    Code for running inference and finetuning with SAM 3 model

    ...Compared with SAM 2, SAM 3 introduces the ability to exhaustively segment all instances of an open-vocabulary concept specified by a short phrase or exemplars, scaling to a vastly larger set of categories than traditional closed-set models. This capability is grounded in a new data engine that automatically annotated over four million unique concepts, producing a massive open-vocabulary segmentation dataset and enabling the model to achieve 75–80% of human performance on the SA-CO benchmark, which itself spans 270K unique concepts.
    Downloads: 23 This Week
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  • 2
    SAM 2

    SAM 2

    The repository provides code for running inference with SAM 2

    SAM2 is a next-generation version of the Segment Anything Model (SAM), designed to improve performance, generalization, and efficiency in promptable image segmentation tasks. It retains the core promptable interface—accepting points, boxes, or masks—but incorporates architectural and training enhancements to produce higher-fidelity masks, better boundary adherence, and robustness to complex scenes.
    Downloads: 15 This Week
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  • 3
    SAM 3D Objects

    SAM 3D Objects

    Models for object and human mesh reconstruction

    SAM 3D Objects is a foundation model that reconstructs full 3D geometry, texture, and spatial layout of objects and scenes from a single image. Given one RGB image and object masks (for example, from the Segment Anything family), it can generate a textured 3D mesh for each object, including pose and approximate scene layout. The model is specifically designed to be robust in real-world images with clutter, occlusions, small objects, and unusual viewpoints, where many earlier 3D-from-image systems struggle. ...
    Downloads: 7 This Week
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  • 4
    SAM 3D Body

    SAM 3D Body

    Code for running inference with the SAM 3D Body Model 3DB

    SAM 3D Body is a promptable model for single-image full-body 3D human mesh recovery, designed to estimate detailed human pose and shape from just one RGB image. It reconstructs the full body, including feet and hands, using the Momentum Human Rig (MHR), a parametric mesh representation that decouples skeletal structure from surface shape for more accurate and interpretable results.
    Downloads: 4 This Week
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  • 5
    SAM (Sequence Alignment/Map) is a flexible generic format for storing nucleotide sequence alignment. SAMtools provide efficient utilities on manipulating alignments in the SAM format. The main samtools source code repository moved to GitHub in March 2012. For ongoing development since then, see http://github.com/samtools/samtools
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    Downloads: 432 This Week
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  • 6
    Grounded-Segment-Anything

    Grounded-Segment-Anything

    Marrying Grounding DINO with Segment Anything & Stable Diffusion

    ...The core idea behind the project is to pair Grounding DINO — a zero-shot object detector that can locate objects described by natural language — with Segment Anything Model (SAM), which can produce detailed masks for objects once they are localized. This fusion lets users provide arbitrary text descriptions (e.g., “a cat, a bicycle, or a coffee mug”), have the detection model find relevant bounding boxes, and then use SAM to generate precise segmentation masks that isolate each object in the scene.
    Downloads: 0 This Week
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  • 7
    Segment Anything

    Segment Anything

    Provides code for running inference with the SegmentAnything Model

    Segment Anything (SAM) is a foundation model for image segmentation that’s designed to work “out of the box” on a wide variety of images without task-specific fine-tuning. It’s a promptable segmenter: you guide it with points, boxes, or rough masks, and it predicts high-quality object masks consistent with the prompt. The architecture separates a powerful image encoder from a lightweight mask decoder, so the heavy vision work can be computed once and the interactive part stays fast. ...
    Downloads: 1 This Week
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  • 8
    Sa2VA

    Sa2VA

    Official Repo For "Sa2VA: Marrying SAM2 with LLaVA

    Sa2VA is a cutting-edge open-source multi-modal large language model (MLLM) developed by ByteDance that unifies dense segmentation, visual understanding, and language-based reasoning across both images and videos. It merges the segmentation power of a state-of-the-art video segmentation model (based on SAM‑2) with the vision-language reasoning capabilities of a strong LLM backbone (derived from models like InternVL2.5 / Qwen-VL series), yielding a system that can answer questions about visual content, perform referring segmentation, and maintain temporal consistency across frames in video. With minimal instruction tuning (often one-shot), Sa2VA can handle tasks such as “segment the main subject,” “what are the objects in this scene?”...
    Downloads: 1 This Week
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  • 9

    BBMap

    BBMap short read aligner, and other bioinformatic tools.

    ...Dedupe: Simplifies assemblies by removing duplicate or contained subsequences that share a target percent identity. Reformat: Reformats reads between fasta/fastq/scarf/fasta+qual/sam, interleaved/paired, and ASCII-33/64, at over 500 MB/s. BBDuk: Filters, trims, or masks reads with kmer matches to an artifact/contaminant file. ...and more!
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    Downloads: 389 This Week
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  • 10
    RECOIL

    RECOIL

    Retro Computer Image Library

    Retro Computer Image Library decodes Amiga, Amstrad CPC, Apple II, Atari 8-bit, Atari Portfolio, Atari ST/TT/Falcon, BBC Micro, Commodore 64, Commodore 16/116/Plus4, Commodore 128, Electronika BK, FM Towns, HP 48, Macintosh 128K, MSX, NEC PC-80/88/98, Oric, SAM Coupe, Sharp X68000, Tandy 1000, Timex 2048, TRS-80, TRS-80 Color Computer, ZX81 and ZX Spectrum picture formats. The project contains a simple viewer, plug-ins for general-purpose image viewers and editors, and an everything-to-png converter.
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    Downloads: 71 This Week
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  • 11
    crossmap

    crossmap

    convert genome coordinates betweeen assemblies

    CrossMap is a program for convenient conversion of genome coordinates and genomeannotation files between assemblies (eg. lift from GRCh36/hg18 to GRCh37/hg19 or vice versa).It support file in BAM, SAM, BED, Wiggle, BigWig, GFF, GTF format.
    Downloads: 3 This Week
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  • 12

    miARma-Seq

    a A suite designed to study mRNAs, miRNAs and circRNAs

    miARma-Seq, which stands for miRNA-Seq And RNA-Seq Multiprocess Analysis, is a suite designed to study mRNAs, miRNAs and circRNAs. It is able to perform differential expression analysis, miRNA-mRNA target prediction and functional analysis among others. Most importantly, it can be applied to any sequenced organism, and it can be initiated at any step of the workflow. As a stand-alone tool, is both easy to install and extremely flexible in terms of its use. It brings together...
    Downloads: 0 This Week
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  • 13
    ophcrack

    ophcrack

    A Windows password cracker based on rainbow tables

    Ophcrack is a Windows password cracker based on a time-memory trade-off using rainbow tables. This is a new variant of Hellman's original trade-off, with better performance. It recovers 99.9% of alphanumeric passwords in seconds.
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    Downloads: 2,270 This Week
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  • 14
    ScummVM

    ScummVM

    A cross-platform interpreter for many point-and-click adventure games

    ScummVM is a cross-platform interpreter for many point-and-click adventure games. This includes LucasArts SCUMM games (such as Monkey Island 1-3, Day of the Tentacle, Sam & Max, ...), many of Sierra's AGI and SCI games (such as King's Quest 1-6, Space Quest 1-5, ...), Discworld 1 and 2, Simon the Sorcerer 1 and 2, Beneath A Steel Sky, Lure of the Temptress, Broken Sword 1 and 2, Flight of the Amazon Queen, Gobliiins 1-3, The Legend of Kyrandia 1-3, many of Humongous Entertainment's children's SCUMM games (including Freddi Fish and Putt Putt games) and many more. ...
    Downloads: 118 This Week
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  • 15
    sfbf-ui

    sfbf-ui

    UI frontend for sfbf, a useful application to search for largest files

    UI frontend for sfbf, a useful application to search for largest files on file systems It brings features such as : - Fast file search to locate largest files - Configurable search depth - Various export formats (txt, json, xml, html) - Regular expression matching This project is licensed under the WTFPL (Do What The Fuck You Want To Public License, Version 2) Copyright © 2017 spypunk spypunk@gmail.com This work is free. You can redistribute it and/or modify it under the terms of the Do What The Fuck You Want To Public License, Version 2, as published by Sam Hocevar. See the COPYING file for more details.
    Downloads: 0 This Week
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  • 16
    sfbf

    sfbf

    Useful console application to search for largest files on file systems

    ...It brings features such as : - Fast file search to locate largest files - Configurable search depth - Various output formats (txt, json, xml, html, csv) - Regular expression matching This project is licensed under the WTFPL (Do What The Fuck You Want To Public License, Version 2) Copyright © 2017 spypunk spypunk@gmail.com This work is free. You can redistribute it and/or modify it under the terms of the Do What The Fuck You Want To Public License, Version 2, as published by Sam Hocevar. See the COPYING file for more details.
    Downloads: 0 This Week
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  • 17
    BarraCUDA Fast Short Read Aligner
    Barracuda is a high-speed sequence aligner based on Sanger's BWA and utilizes the latest Nvidia CUDA architecture for accelerating alignments of sequence reads generated by next-generation sequencers.
    Downloads: 0 This Week
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  • 18

    Placnet

    Placnet project

    ...It's been optimized to work with Illumina sequences but it also works with 454, Iontorrent or any of the actual sequence technologies. The input of placnet is a set of contigs and one or more SAM files with the mapping of the reads against the contigs. Placnet obtains a set of files, easily opened on Cytoscape software or other network tools. Please cite PLACNET as: Lanza VF, de Toro M, Garcillán-Barcia MP, Mora A, Blanco J, Coque TM, de la Cruz F: Plasmid Flux in Escherichia coli ST131 Sublineages, Analyzed by Plasmid Constellation Network (PLACNET), a New Method for Plasmid Reconstruction from Whole Genome Sequences. ...
    Downloads: 6 This Week
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  • 19
    converts a SAM file to fasta file. SAM file is a file output from bwa alignment software. It outputs aligned fasta file.
    Downloads: 0 This Week
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  • 20

    bio-cargo

    CARGO - Compressed ARchival for GenOmics

    CARGO is a high-level framework that can semi-automatically generate software systems optimized for the compressed storage of arbitrary types of large genomic data collections. Straightforward applications of CARGO methods to compress FASTQ and SAM format archives require only a few lines of code, produce solutions that match and sometimes outperform specialized format-tailored compressors, and scale well to multi-TB datasets.
    Downloads: 0 This Week
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  • 21

    SAMSVM

    A tool for misalignment filtration on SAM-format sequences with SVM

    Applying the LIBSVM, a package of support vector machine, SAMSVM was developed to correctly detect and filter the misaligned reads of SAM format. Such filtration can reduce false positives in alignment and the following variant analysis.
    Downloads: 0 This Week
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  • 22

    Transcriptome assembly ORA

    Reference-based transcriptome reconstruction software

    ...It performs reconstruction starting from short reads obtained from RNA-seq. It is best suited to manage the transcriptomes of lower eukaryotes with a low number of introns per gene and it can be used also for procariotes. It needs a SAM file with the reads aligned on the reference genome and (optional) a gff file with the position of genes on the reference genome. It provides in output the positions of the transcripts identified, the transcripts names based on the genes present on the gff file anf the size of UTR regions.
    Downloads: 0 This Week
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  • 23
    MIF85Tracker

    MIF85Tracker

    chiptune music tracker for Philips SAA-1099

    Multiplatform GNU/GPL chiptune music tracker for Philips SAA-1099 soundchip with 6 channels, which was used in Sam Coupé micro-computer and also in sound interface MIF 85 for the Tesla PMD 85 (an 8-bit personal micro-computer produced in eighties of twentieth century in former Czechoslovakia). This is a very first music tracker for this soundchip on PC platform!
    Downloads: 0 This Week
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  • 24
    pyz80 is a z80 cross-assembler written entirely in Python. It accepts text files with the syntax of the Sam Coupe's popular COMET assembler, and outputs a disk image suitable for loading in SimCoupe or transferring to floppy disk for use with a real Sam.
    Downloads: 1 This Week
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  • 25
    unixadmin

    unixadmin

    unixadmin is a system administration tool for Linux and OS X

    unixadmin ============ unixadmin (Previously known as smc/syspert) Is a system administration tool which supports all versions of UNIX and Debian based versions and Red Hat versions of Linux, which supports major features such as user administration, disk administration and system administration This program sets to replace smit in IBM AIX and sam in HP-UX This program is the Linux equivlient of smit and SAM in AIX and HP-UX
    Downloads: 0 This Week
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