BBMap short read aligner, and other bioinformatic tools.
High-performance read alignment, quantification and mutation discovery
Molecular dynamics by NMR data analysis
A code primarily aimed at DNA and RNA coarse-grained simulations
The UEA sRNA Workbench
PCR primers / probes design from multiple & degenerate sequences
R code/package for virus small RNA sequence data
Somatic fusion-genes finder for RNA-seq data
tumor epigenetic database
RNA editing detection by NGS data
a A suite designed to study mRNAs, miRNAs and circRNAs
C++ header only library with AI and bioinformatics algorithms
DNA/RNA Sequence K-mer Toolkit
Tools for genomic analysis
OLego – short or long RNA-seq read mapping to discover exon junction
Reference-based transcriptome reconstruction software
Bacterial Intergenic Region Analysis Pipeline
Crosslinking induced mutation site analysis
Cupid: simultaneous reconstruction of miRNA-target and ceRNA networks
Create virtual DNA/RNA agarose gels
Analyze time-course data with significance tests, clustering, modeling