Showing 12 open source projects for "workbench"

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  • 1
    sRNAWorkbench

    sRNAWorkbench

    The UEA sRNA Workbench

    A suite of tools for analysing small RNA (sRNA) data from Next Generation Sequencing devices. Including expression profiling of known mirco RNA (miRNA), identification of novel miRNA in deep-sequencing data and identification of other interesting landmarks within high-throughput genetic data
    Downloads: 4 This Week
    Last Update:
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  • 2
    SBW (Systems Biology Workbench)

    SBW (Systems Biology Workbench)

    Framework for Systems Biology

    The Systems Biology Workbench(SBW) is a framework for application intercommunications. It uses a broker-based, distributed, message-passing architecture, supports many languages including Java, C++, Perl & Python, and runs under Linux,OSX & Win32. It comes with a large number of modules, encompassing the whole modeling cycle: creating computational models, simulating and analyzing them, visualizing the information, in order to improve the models.
    Downloads: 7 This Week
    Last Update:
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  • 3
    @Note2

    @Note2

    @Note2 - A workbench for Biomedical Text Mining

    Biomedical Text Mining (BioTM) is providing valuable approaches to the automated curation of scientific literature.
    Downloads: 4 This Week
    Last Update:
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  • 4

    CUDASW++: Smith-Waterman Algorithm

    The fastest Smith-Waterman protein database search algorithm on GPUs

    CUDASW++ software is a public open source software for Smith-Waterman protein database searches on Graphics Processing Units with CUDA. This software have been added to the NVIDIA Tesla Bio Workbench (http://www.nvidia.com/object/swplusplus_on_tesla.html
    Downloads: 0 This Week
    Last Update:
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  • 5
    N2A

    N2A

    Neurons to Algorithms - A neural modeling and simulation workbench

    "Neurons to Algorithms" (N2A) is a language for modeling neural systems, along with a software tool for editing models and simulating them. N2A is currently "alpha" software. The download provided on SF is for convenience to those who wish to preview the software. Please see our site on github for development status.
    Downloads: 0 This Week
    Last Update:
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  • 6
    An open source workbench for chemo- and bioinformatics built on the Eclipse Rich Client Platform (RCP).
    Downloads: 1 This Week
    Last Update:
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  • 7
    Biological Network Analyzer
    Workbench for visualizing biological networks (regulatory, interaction, and metabolic). Can be used as a front-end for BNDB datawarehouses, but also as stand-alone tool.
    Downloads: 0 This Week
    Last Update:
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  • 8
    Metaneva
    This workbench tries to manage and analyze neuroscientific animal data with an emphasis on behaviorally orientated experiments. It's goal is to use the behavioral experimental data (stimulus, task, species...) as its source and perform analysis to e
    Downloads: 0 This Week
    Last Update:
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  • 9
    SLEDRIDE: Simplified Learning about Expression Data Running in a Desktop Environment. To provide a general workbench for pipe-lining microarray gene expression data from supervised learning results into unsupervised learning methods.
    Downloads: 0 This Week
    Last Update:
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  • 10
    A fast parallel error correction tool for short reads. This software have been added to the NVIDIA Tesla Bio Workbench (http://www.nvidia.com/object/ec_on_tesla.html)
    Downloads: 0 This Week
    Last Update:
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  • 11
    @Note2 is now available in www.anote-project.org @Note is a Biomedical Text Mining workbench that integrates current Biomedical Text Mining (BioTM) methods and provides biologists with intuitive tools capable of supporting their bibliographic searches and further literature curation.
    Downloads: 0 This Week
    Last Update:
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  • 12
    The ORIEL workbench is a data browsing interface for REST-based information retrieval services. Originally developed for Bioinformatics applications.
    Downloads: 0 This Week
    Last Update:
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