Showing 2101 open source projects for "java open source"

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  • 1
    A wrapper that makes the UMLS MetaMap tool (http://mmtx.nlm.nih.gov/) available as an UIMA analysis engine.
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  • 2
    Visualize your bioinformatics analysis process.
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  • 3
    WhichGenes is a web-based bioinformatics tool. It allows the user to extract lists of genes from multiple sources in order to use them for further experiments.
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  • 4
    Care4G is a web-based software, as forking of the most famous care2x, it will be a complete HIS for the II Millennium...
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  • Atera all-in-one platform IT management software with AI agents Icon
    Atera all-in-one platform IT management software with AI agents

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  • 5
    ICE Cafe is Open sourse sequence cromatgram alginer and viewer. The first purpose of this sofware is to find a RNA Editing by Comparing Genomic sequence to RNA sequence, or by using the ICE method developed at Suzuki Lab,Dept Chem&Biotech Tokyo Univ
    Downloads: 0 This Week
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  • 6
    SINAM -- Simulation Interface for Network Analysis of Metabolism
    Downloads: 0 This Week
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  • 7
    Parallelized (threaded) software to enumerate all maximal subgraphs of a graph that exceed a specified density, even if they overlap.
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  • 8
    BioPerl implemented in JavaScript. The library aims to promote and aid the development of bioinformatics applications in JavaScript much the same way as BioPerl helps bioinformatics development in Perl.
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  • 9
    Metaneva
    This workbench tries to manage and analyze neuroscientific animal data with an emphasis on behaviorally orientated experiments. It's goal is to use the behavioral experimental data (stimulus, task, species...) as its source and perform analysis to e
    Downloads: 0 This Week
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  • Free and Open Source HR Software Icon
    Free and Open Source HR Software

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  • 10
    LocalMotif is a bioinformatics tool for discovering nucleotide motifs in a set of gene regulatory sequences. It takes into account the positional distribution of the motifs relative to a biological landmark. Look out for an updated version in May.
    Downloads: 0 This Week
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  • 11
    FRASS
    FRASS is developed for RNA Structure Comparison. It allows one to compare the 3D structures of two RNA molecules and to scan a database containing all the known RNA 3D structures against a single query.
    Downloads: 0 This Week
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  • 12
    DimReduction project provide an open-source multiplatform (Java) graphical environment for bioinformatics problems that supports many feature selection algorithms, pattern recognition techniques, criterion functions and graphic visualization tools.
    Downloads: 0 This Week
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  • 13
    SnoopCGH is a java desktop application for visualising and exploring comparative genomic hybridization (CGH) data.
    Downloads: 0 This Week
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  • 14
    This project develops a web-based (JSP) Fuzzy Rule-Based Expert System for analyzing ECG (electro cardio gram) signals & diagnosing Tachi-Arrhythmias. Proj. main blocks: inference engine, knowledgebase, KB editor, explanation, and feature extraction.
    Downloads: 0 This Week
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  • 15
    Join Finder helps locate joins by blasting contig end sequence probes and looks for link-supported joins. Probes are BLASTed against 2KB ends of contigs, strict matches are examined against link information and potential joins are outputed to file.
    Downloads: 0 This Week
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  • 16
    UCLA LONI Pipeline Globus Plugin
    Repository for the UCLA Laboratory of Neuro Imaging (LONI) Pipeline Globus Plugin Development
    Downloads: 0 This Week
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  • 17
    Prism is a system for displaying a visual overview of the types of research being done at a given institution and to quickly connect researchers with like interests.
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  • 18
    PhyloPattern is a Java/Prolog API, helpful to simulate human reading of phylogenetic trees. Bioinformatician can: annotate trees, apply complex patterns to a tree to search specific architectures or extract information, compare trees with dynamically gen
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  • 19
    A collection of python classes for computational ecology and evolutionary biology.
    Downloads: 0 This Week
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  • 20
    A univariate and multivariate analysis UI. This project is no longer under development. Please use as you wish.
    Downloads: 3 This Week
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  • 21
    A database schema and web application to archive, search, share, and download data of maximum body sizes of different taxonomic groups during the history of life on earth.
    Downloads: 0 This Week
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  • 22
    SNP ratio test
    The SNP ratio test can assess significance of enrichment of significant associations in genome-wide association studies. Tests can be applied to pathways such as KEGG/GO, or user-defined pathways to test specific hypotheses. See link below for more.
    Downloads: 0 This Week
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  • 23
    Biodiversity Information Group develops software tools and data standards that enable herbaria and museums to create dynamic distributed queries of their online databases. See http://bit.ly/bfirSh and http://bit.ly/bwpnSY for latest developments.
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  • 24
    TaxonFinder is an application that annotates taxon found in literature. The application harnesses a hybrid algorithm that is necessarily a combination of morphological analysis, dictionary lookup and Levenstein Distance algorithm.
    Downloads: 0 This Week
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  • 25
    HealthAgents is an open source web-based distributed decision support system (DSS) which provides hospitals and organisations with a reliable tool to aid in the diagnosis of brain tumours and their prognosis aiming to avoid invasive surgical procedures
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