Showing 802 open source projects for "java open source"

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  • 1
    SRMA is a post-alignment micro re-aligner for next-generation high throughput sequencing data.
    Downloads: 1 This Week
    Last Update:
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  • 2
    Reference compression tools for sequence read data.
    Downloads: 0 This Week
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  • 3
    Corra [BMC Bioinformatics 2008] is a computational framework & tools for discovery proteomics using label free LC-MS and ATAQS [BMC Bioinformatics 2011] is a computational framework & tools for validation proteomics using SRM LC-MS method.
    Downloads: 1 This Week
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  • 4
    PhyloSort sorts phylogenetic trees by searching for user-specified subtrees that contain a monophyletic group of interest defined by operational taxonomic units.
    Downloads: 0 This Week
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  • Financial reporting cloud-based software. Icon
    Financial reporting cloud-based software.

    For companies looking to automate their consolidation and financial statement function

    The software is cloud based and automates complexities around consolidating and reporting for groups with multiple year ends, currencies and ERP systems with a slice and dice approach to reporting. While retaining the structure, control and validation needed in a financial reporting tool, we’ve managed to keep things flexible.
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  • 5
    GenoGUARD is a DNA sequence screening software that implements the best match method recommended by the federal government to detect the presence of biosecurity threats in synthetic DNA orders.
    Downloads: 0 This Week
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  • 6
    HATS (Haplotype Amplification in Tumor Sequences) is a tool that calls the amplified alleles, and thus amplified haplotype, in copy number aberration regions in next generation sequencing tumor data. The amplified haplotype may reveal gene variants.
    Downloads: 0 This Week
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  • 7
    gfit creates an interface between computational models and experimental data and provides tools for their analysis
    Downloads: 0 This Week
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  • 8
    GEAX is a Java application used to visualize and analyze cross-species gene expression microarray data.The program allows comparisons based on fold-change, p-value, quantile matching, or a combination of criteria.
    Downloads: 0 This Week
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  • 9
    TMAJ is software for Tissue MicroArrays (TMA's). Patients, specimens, blocks, slides, cores, images, and scores can all be stored and viewed. Features include advanced security, custom dynamic fields, and an image analysis program.
    Downloads: 1 This Week
    Last Update:
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  • Loan management software that makes it easy. Icon
    Loan management software that makes it easy.

    Ideal for lending professionals who are looking for a feature rich loan management system

    Bryt Software is ideal for lending professionals who are looking for a feature rich loan management system that is intuitive and easy to use. We are 100% cloud-based, software as a service. We believe in providing our customers with fair and honest pricing. Our monthly fees are based on your number of users and we have a minimal implementation charge.
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  • 10
    JCVI VICS
    VI Compute Server (VICS) is a collection of grid-enabled bioinformatics tools with HTTP (browser) and Web Services (scriptable) interfaces. JCVI VICS is licensed under the Perl Foundation Artistic License 2.0.
    Downloads: 0 This Week
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  • 11
    Managing Medical Insults.
    Downloads: 0 This Week
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  • 12
    A simple tool to import the diff, gtf and tracking files from cufflinks, cuffcompare, cuffdiff into a new sqlite database for data mining.
    Downloads: 0 This Week
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  • 13
    Executable program that measures sizes and other properties of colonies arrayed in a grid format (intended for 768, 384, or 96 colonies on agar plates) from jpeg images
    Downloads: 0 This Week
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  • 14
    Adjusting PKL-Files derived from MS-experiments. The development of the project has been MOVED TO https://github.com/binfalse/adjustpkl
    Downloads: 0 This Week
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  • 15
    This is bionically project.
    Downloads: 0 This Week
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  • 16
    The Xholon project explores: software as systems of linked nodes, organized hierarchically. The Xholon toolkit supports this back-to-basics approach, and demonstrates practical benefits through examples from numerous domains.
    Downloads: 0 This Week
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  • 17
    An online database project with database and web interface to archive, manage, search and download individual-based life history data that have been collected from wild primate populations.
    Downloads: 0 This Week
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  • 18
    FastPval is multiple stage p-value computing software that computes empirical p-values from a large set of permutated/resampled background data.
    Downloads: 0 This Week
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  • 19
    JHeatChart
    JHeatChart is a simple Java library for generating heat map charts.
    Downloads: 0 This Week
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  • 20
    HeliconiusDB is a project to develop a database schema and web-based software tools for the study of Heliconius butterflies (and other organisms) in evolutionary biology.
    Downloads: 0 This Week
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  • 21
    Microarray Gene Expression Database Group and OMG Gene Expression Standard (MAGE)
    Downloads: 4 This Week
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  • 22
    Cloe (Closure Editor) is a graphical, Java based tool used for editing contigs, resolving contig features, and closing both sequencing and physical gaps.
    Downloads: 0 This Week
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  • 23
    SAFEGUI is a graphical interface to the safe R package which performs resampling based categorical significance testing for gene expression data.
    Downloads: 0 This Week
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  • 24
    Genevar (GENe Expression VARiation) is a platform of database and web services for the integrative analysis and visulization of SNP-gene assocaitaions in eQTL studies.
    Downloads: 0 This Week
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  • 25
    IDEA (Interactive Display for Evolutionary Analyses) augments PAML with a graphical interface, phylogeny reconstruction using PhyML or PHYLIP, convenient and efficient parallel processing and visualizations.
    Downloads: 0 This Week
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