Search Results for "immunohistochemistry image analysis"

Showing 420 open source projects for "immunohistochemistry image analysis"

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  • 1
    Static Analysis Tools for PHP

    Static Analysis Tools for PHP

    Docker image that provides static analysis tools for PHP

    Docker image providing static analysis tools for PHP. The list of available tools and the installer is actually managed in the jakzal/toolbox repository. Docker image with quality analysis tools for PHP. To run the selected tool inside the container, you'll need to mount the project directory on the container with -v "$(pwd):/project". Some tools like to write to the /tmp directory (like PHPStan, or Behat in some cases), therefore it's often useful to share it between docker runs, i.e. with -v...
    Downloads: 0 This Week
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  • 2
    Blender GIS

    Blender GIS

    Blender addons to make the bridge between Blender and geographic data

    Import in Blender most commons GIS data format, Shapefile vector, raster image, geotiff DEM, OpenStreetMap XML. There are a lot of possibilities to create a 3D terrain from geographic data with BlenderGIS, check the Flowchart to have an overview. Display dynamics web maps inside Blender 3d view, requests for OpenStreetMap data (buildings, roads, etc.), get true elevation data from the NASA SRTM mission. Manage georeferencing information of a scene, compute a terrain mesh by Delaunay...
    Downloads: 126 This Week
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  • 3
    PDF4QT

    PDF4QT

    Open source PDF editor

    ... the license LGPLv3. The applications are primarily used by target users to view, edit, manipulate or compare PDF documents. Users can preview these applications in the screenshots section of this webpage. Basic browsing and lots of other functionalities, such as encryption, reading a document, verification of digital signatures, editing of annotations, searching for text using regular expressions, drawing pages into an image, and much more. Several plug-ins are available.
    Downloads: 60 This Week
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  • 4
    Waifu2x-Extension-GUI

    Waifu2x-Extension-GUI

    Video, Image and GIF upscale/enlarge(Super-Resolution)

    Photo/Video/GIF enlargement and Video frame interpolation using machine learning. Waifu2x-Extension-GUI is a video, image and GIF upscale/enlarge(Super-Resolution) and Video frame interpolation. Achieved with Waifu2x, Real-ESRGAN, Real-CUGAN, RTX Video Super Resolution VSR, SRMD, RealSR, Anime4K, RIFE, IFRNet, CAIN, DAIN, and ACNet. The beta build has a faster update cycle than the stable build, which allows you to experience the latest features of the software in advance. Beta builds are more...
    Downloads: 12 This Week
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  • 5
    Coca

    Coca

    Coca is a toolbox which is design for legacy system refactoring

    Coca is a toolbox that is design for legacy system refactoring and analysis, including call graph, concept analysis, api tree, and design patterns suggestions. Requirements: graphviz for dot file to image (such as svg, png). The easiest way to get coca is to use one of the pre-built release binaries which are available for OSX, Linux, and Windows on the release page.
    Downloads: 3 This Week
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  • 6
    MetaGPT

    MetaGPT

    The Multi-Agent Framework

    The Multi-Agent Framework: Given one line Requirement, return PRD, Design, Tasks, Repo. Assign different roles to GPTs to form a collaborative software entity for complex tasks. MetaGPT takes a one-line requirement as input and outputs user stories / competitive analysis/requirements/data structures / APIs / documents, etc. Internally, MetaGPT includes product managers/architects/project managers/engineers. It provides the entire process of a software company along with carefully orchestrated...
    Downloads: 3 This Week
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  • 7
    Clair

    Clair

    Vulnerability Static Analysis for Containers

    Clair is an application for parsing image contents and reporting vulnerabilities affecting the contents. This is done via static analysis and not at runtime. Clair v4 utilizes the ClairCore library as its engine for examining contents and reporting vulnerabilities. At a high level you can consider Clair a service wrapper to the functionality provided in the ClairCore library. The main branch may be in an unstable or even broken state during development. Please use releases instead of the main...
    Downloads: 2 This Week
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  • 8
    ML.NET

    ML.NET

    Open source and cross-platform machine learning framework for .NET

    ... that automates the process of building best performing models for your Machine Learning scenario. All you have to do is load your data, and AutoML takes care of the rest of the model building process. ML.NET has been designed as an extensible platform so that you can consume other popular ML frameworks (TensorFlow, ONNX, Infer.NET, and more) and have access to even more machine learning scenarios, like image classification, object detection, and more.
    Downloads: 2 This Week
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  • 9
    Learning Interpretability Tool

    Learning Interpretability Tool

    Interactively analyze ML models to understand their behavior

    The Learning Interpretability Tool (LIT, formerly known as the Language Interpretability Tool) is a visual, interactive ML model-understanding tool that supports text, image, and tabular data. It can be run as a standalone server, or inside of notebook environments such as Colab, Jupyter, and Google Cloud Vertex AI notebooks.
    Downloads: 2 This Week
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  • 10
    MatImage

    MatImage

    Image Processing library for Matlab

    matImage is an open-source MATLAB library for image processing and analysis. It provides a variety of tools for image enhancement, segmentation, and feature extraction. It’s especially useful for users working on biomedical images or those needing detailed image analysis in MATLAB.
    Downloads: 0 This Week
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  • 11
    SimpleITK

    SimpleITK

    A layer built on top of the Insight Toolkit (ITK)

    SimpleITK is an image analysis toolkit with a large number of components supporting general filtering operations, image segmentation and registration. It is built on top of the Insight Segmentation and Registration Toolkit ITK with the intent of providing a simplified interface to ITK. SimpleITK itself is written in C++ but is available for a large number of programming languages. Wrapping of the C++ code is accomplished through SWIG, in principle, any language wrapped by SWIG should...
    Downloads: 1 This Week
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  • 12
    Feishu ChatGPT

    Feishu ChatGPT

    Voice dialogue, role-playing, multi-topic discussion, picture creation

    Feishu × (GPT-3.5 + DALL·E + Whisper) = flying-like work experience. Voice dialogue, role-playing, multi-topic discussion, picture creation, table analysis, document export. Golang language, it goes without saying! Master the gin framework proficiently, developing the backend is as natural as breathing! Familiar with the SDKs of DingTalk, Feishu, Qiwei and other platforms, and be able to develop and integrate a series of amazing functions! Proficient in platform-based detail thinking, let...
    Downloads: 2 This Week
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  • 13
    whiteboxgui

    whiteboxgui

    An interactive GUI for WhiteboxTools in a Jupyter-based environment

    The whiteboxgui Python package is a Jupyter frontend for WhiteboxTools, an advanced geospatial data analysis platform developed by Prof. John Lindsay (webpage; jblindsay) at the University of Guelph's Geomorphometry and Hydrogeomatics Research Group. WhiteboxTools can be used to perform common geographical information systems (GIS) analysis operations, such as cost-distance analysis, distance buffering, and raster reclassification. Remote sensing and image processing tasks include image...
    Downloads: 0 This Week
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  • 14
    DeepVariant

    DeepVariant

    DeepVariant is an analysis pipeline that uses a deep neural networks

    DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data. DeepVariant is a deep learning-based variant caller that takes aligned reads (in BAM or CRAM format), produces pileup image tensors from them, classifies each tensor using a convolutional neural network, and finally reports the results in a standard VCF or gVCF file. DeepTrio is a deep learning-based trio variant caller built on top of DeepVariant. DeepTrio...
    Downloads: 1 This Week
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  • 15
    PHP Client For NLP Cloud

    PHP Client For NLP Cloud

    NLP Cloud serves high performance pre-trained or custom models for NER

    NLP Cloud serves high performance pre-trained or custom models for NER, sentiment-analysis, classification, summarization, dialogue summarization, paraphrasing, intent classification, product description and ad generation, chatbot, grammar and spelling correction, keywords and keyphrases extraction, text generation, image generation, blog post generation, code generation, question answering, automatic speech recognition, machine translation, language detection, semantic search, semantic...
    Downloads: 1 This Week
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  • 16
    The Scientific Image Analysis (SIA) software is an image processing application written in MATLAB for scientific analysis of images and video. SIA is designed to be intuitive and easy to use, and is free to download. While SIA is designed to meet the image processing needs of biologists, its functionalities can be used for a wide variety of applications. With SIA, users can calibrate and make single and continuous measurements of length, angle, area and the average color values within a region...
    Downloads: 0 This Week
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  • 17
    dive

    dive

    A tool for exploring each layer in a docker image

    .... The lower left pane shows basic layer info and an experimental metric that will guess how much wasted space your image contains. This might be from duplicating files across layers, moving files across layers, or not fully removing files. Both a percentage "score" and total wasted file space is provided. You can build a Docker image and do an immediate analysis with one command: dive build -t some-tag .
    Downloads: 0 This Week
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  • 18
    fastdup

    fastdup

    An unsupervised and free tool for image and video dataset analysis

    fastdup is a powerful free tool designed to rapidly extract valuable insights from your image & video datasets. Assisting you to increase your dataset images & labels quality and reduce your data operations costs at an unparalleled scale.
    Downloads: 0 This Week
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  • 19
    Large Language Models (LLMs)

    Large Language Models (LLMs)

    Connect MATLAB to LLM APIs, including OpenAI® Chat Completions

    This repository enables MATLAB to connect with large language models (LLMs) such as OpenAI's ChatGPT, DALL-E, Azure OpenAI, and Ollama, integrating their natural language processing and image generation capabilities directly within MATLAB environments. It facilitates creating chatbots, summarizing text, and image generation, among other tasks.
    Downloads: 0 This Week
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  • 20
    solgraph

    solgraph

    Visualize Solidity control flow for smart contract security analysis

    Visualize Solidity control flow for smart contract security analysis. Generates a DOT graph that visualizes the function control flow of a Solidity contract and highlights potential security vulnerabilities. A nice example of piping contract source that is in your clipboard through solgraph, dot, and preview: (Use whatever image previewer is available on your system; Preview.app is available on Mac) You have to have graphviz installed (brew install graphviz) to render the DOT file as an image...
    Downloads: 0 This Week
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  • 21
    EMBA

    EMBA

    The firmware security analyzer

    .... EMBA is a command line tool with the possibility to generate an easy-to-use web report for further analysis. EMBA assists the penetration testers and product security teams in the identification of weak spots and vulnerabilities in the firmware image. EMBA provides as much information as possible about the firmware, that the tester can decide on focus areas and is responsible for verifying and interpreting the results.
    Downloads: 0 This Week
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  • 22
    GIXY

    GIXY

    Nginx configuration static analyzer

    ... arguments with the help command: gixy --help. Gixy is available as a Docker image from the Docker hub. To use it, mount the configuration that you want to analyse as a volume and provide the path to the configuration file when running the Gixy image. If you have an image that already contains your nginx configuration, you can share the configuration with the Gixy container as a volume.
    Downloads: 0 This Week
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  • 23
    PipeCD

    PipeCD

    The One CD for All {applications, platforms, operations}

    A GitOps style continuous delivery platform that provides consistent deployment and operations experience for any applications. Automatically trigger a new deployment when a defined event has occurred (e.g. container image pushed, helm chart published, etc). Support multiple application kinds on multi-cloud including Kubernetes, Terraform, Cloud Run, AWS Lambda, Amazon ECS. Support multiple analysis providers including Prometheus, Datadog, Stackdriver, and more. Easy to operate multi-cluster...
    Downloads: 0 This Week
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  • 24
    MolecularGraph.jl

    MolecularGraph.jl

    Graph-based molecule modeling toolkit for cheminformatics

    MolecularGraph.jl is a graph-based molecule modeling and chemoinformatics analysis toolkit fully implemented in Julia.
    Downloads: 0 This Week
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  • 25
    AtomAI

    AtomAI

    Deep and Machine Learning for Microscopy

    ... deployment of machine learning algorithms including deep convolutional neural networks, invariant variational autoencoders, and decomposition/unmixing techniques for image and hyperspectral data analysis. Ultimately, it aims to combine the power and flexibility of the PyTorch deep learning framework and the simplicity and intuitive nature of packages such as scikit-learn, with a focus on scientific data.
    Downloads: 0 This Week
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