Open Source Linux Algorithms - Page 3
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Algorithms for Linux
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supercluster
A very fast geospatial point clustering library for browsers and Node
A very fast JavaScript library for geospatial point clustering for browsers and Node. supercluster supports property aggregation with the following two options. Map, a function that returns cluster properties corresponding to a single point. Reduce, a reduce function that merges properties of two clusters into one. -
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PLEASE NOTE that we are in the process of moving to GitHub: https://github.com/jasypt/jasypt Jasypt (Java Simplified Encryption) is a java library which allows the developer to add basic encryption capabilities to his/her projects with minimum effort, and without the need of having deep knowledge on how cryptography works. PLEASE NOTE that we are in the process of moving to GitHub: https://github.com/jasypt/jasypt
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STXXL is an implementation of the C++ standard template library STL for external memory (out-of-core) computations, containers, and algorithms that can process huge volumes of data that only fit on disks.
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An open source workbench for chemo- and bioinformatics built on the Eclipse Rich Client Platform (RCP).
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AhoCorasickDoubleArrayTrie
An extremely fast implementation of Aho Corasick algorithm
AhoCorasickDoubleArrayTrie is a Java implementation of the Aho–Corasick multi-pattern matching algorithm that is optimized using a Double-Array Trie data structure. It is designed for fast keyword scanning across large texts, where you want to search for many patterns simultaneously and efficiently. The core idea is to build an automaton from a dictionary of patterns, then stream through input text to emit matches with minimal overhead. By using a double-array trie representation, the project emphasizes performance and memory efficiency compared to simpler pointer-heavy trie structures, which can matter a lot for large dictionaries or latency-sensitive services. This makes it a strong fit for tasks like content filtering, entity/term spotting, dictionary-based annotation, or high-throughput log/text processing. In short, it’s a specialized, speed-focused library for industrial-strength multi-keyword matching in Java. -
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Delaunator
Fast JavaScript library for Delaunay triangulation of 2D points
Delaunator is a fast library for Delaunay triangulation. It takes as input a set of points. The triangulation is represented as compact arrays of integers. It’s less convenient than other representations but is the reason the library is fast. After constructing a delaunay = Delaunator.from(points) object, it will have a triangles array and a halfedges array, both indexed by half-edge id. What’s a half-edge? A triangle edge may be shared with another triangle. Instead of thinking about each edge A↔︎B, we will use two half-edges A→B and B→A. Having two half-edges is the key to everything this library provides. It will also be useful to have some helper functions to go from one half-edge to the next and previous half-edges in the same triangle. We can draw all the triangle edges without constructing the triangles themselves. -
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FATE
An industrial grade federated learning framework
FATE (Federated AI Technology Enabler) is the world's first industrial grade federated learning open source framework to enable enterprises and institutions to collaborate on data while protecting data security and privacy. It implements secure computation protocols based on homomorphic encryption and multi-party computation (MPC). Supporting various federated learning scenarios, FATE now provides a host of federated learning algorithms, including logistic regression, tree-based algorithms, deep learning and transfer learning. FATE became open-source in February 2019. FATE TSC was established to lead FATE open-source community, with members from major domestic cloud computing and financial service enterprises. FedAI is a community that helps businesses and organizations build AI models effectively and collaboratively, by using data in accordance with user privacy protection, data security, data confidentiality and government regulations. -
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NTU RGB-D
Info and sample codes for "NTU RGB+D Action Recognition Dataset"
The “NTU RGB+D” repository provides access to a large-scale dataset for human action recognition (and its extension, NTU RGB+D 120). The dataset includes multiple modalities (RGB video, depth sequences, infrared video, 3D skeletal joint data) captured with multiple Kinect v2 cameras simultaneously. The repository also contains MATLAB / Python demo scripts for loading, visualizing, and processing skeleton data, mapping between modalities, and handling dataset structure. Multi-modal action recognition dataset, RGB, depth, infrared, skeletal data. Split into background / evaluation sets for one-shot evaluation (in the extended dataset). -
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Omniglot
Omniglot data set for one-shot learning
This repository hosts the Omniglot dataset for one-shot learning, containing handwritten characters across multiple alphabets along with stroke data. It includes both MATLAB and Python starter scripts (e.g. demo.m, demo.py) to illustrate how to load the images and stroke sequences and run baseline experiments (such as classification by modified Hausdorff distance). The dataset provides both an image representation of each character and the time-ordered stroke coordinates ([x, y, t]) for each instance. Includes stroke data (time-sequenced coordinates) per sample. The repository is intended as a benchmark dataset in few-shot / meta-learning research, not as a plug-and-play detection or classification engine. Pre-split “background” and “evaluation” alphabets for standard benchmarking. -
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TextDistance
Compute distance between sequences
Python library for comparing the distance between two or more sequences by many algorithms. For main algorithms, text distance try to call known external libraries (fastest first) if available (installed in your system) and possible (this implementation can compare this type of sequences). Install text distance with extras for this feature. Textdistance use benchmark results for algorithm optimization and try to call the fastest external lib first (if possible). TextDistance show benchmarks results table for your system and saves libraries priorities into the libraries.json file in TextDistance's folder. This file will be used by text distance for calling the fastest algorithm implementation. Default libraries.json is already included in the package. -
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algorithms.js
Classic algorithms and data structures implemented in JavaScript
Traditional Computer Science algorithms and data structures implemented in JavaScript. Algorithms such as collatzConjecture, extendedEuclidean, fastPower, fibonacci, findDivisors, fisherYates, gcd (Greatest common divisor), greatestDifference, lcm (Least common multiple), newtonSqrt, nextPermutation, powerSet, reservoirSampling, shannonEntropy, etc. -
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tsfresh
Automatic extraction of relevant features from time series
tsfresh is a python package. It automatically calculates a large number of time series characteristics, the so called features. tsfresh is used to to extract characteristics from time series. Without tsfresh, you would have to calculate all characteristics by hand. With tsfresh this process is automated and all your features can be calculated automatically. Further tsfresh is compatible with pythons pandas and scikit-learn APIs, two important packages for Data Science endeavours in python. The extracted features can be used to describe or cluster time series based on the extracted characteristics. Further, they can be used to build models that perform classification/regression tasks on the time series. Often the features give new insights into time series and their dynamics. -
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Jojos Binary Diff
Binary Diff and Undiff Utility
JDIFF is a program that outputs the differences between two binary files, either in binary format or in human readable format (detailed or summarized) and then allows to reconstruct the second file from the first one and the diff-file. -
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COPEread
Connecting Overlapped Pair-End Reads
COPE (Connecting Overlapped Pair-End reads) is a method to align and connect the illumina sequenced Pair-End reads of which the insert size is smaller than the sum of the two read length.The connected reads can be used in genome assembly, resequencing and transcriptome research. The full citation: COPE: An accurate k-mer based pair-end reads connection tool to facilitate genome assembly Binghang Liu; Jianying Yuan; Siu-Ming Yiu; Zhenyu Li; Yinlong Xie; Yanxiang Chen; Yujian Shi; Hao Zhang; Yingrui Li; Tak-Wah Lam; Ruibang Luo Bioinformatics (2012) 28(22): 2870-2874; doi: 10.1093/bioinformatics/bts563 -
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ehcp for Ubuntu is a hosting control panel, for multiple domains on single machine. easily installable,easy usage, non-complex,functional. homepage:http://www.ehcp.net * automatically installs and works: dns, apache, mysql, ftp, email, domains,auto updat
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jMetal is an object-oriented Java-based framework for solving multi-objective optimization problems with metaheuristics.
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ViennaCL
Linear algebra and solver library using CUDA, OpenCL, and OpenMP
ViennaCL provides high level C++ interfaces for linear algebra routines on CPUs and GPUs using CUDA, OpenCL, and OpenMP. The focus is on generic implementations of iterative solvers often used for large linear systems and simple integration into existing projects. -
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EN: Code created to show how is done the calculation of a CRC. It includes many different CRCs to choose from. This software was created to help people understand how is the CRC calculated and be able to see it in a practical way, it is also available to copy and use it for your own project. I hope it helps you. ES: Código creado para mostrar como se realiza el cálculo de un CRC. Con el mismo se incluyen varios CRCs que pueden ser escogidos. Este software se creó con el propósito de ayudar a la gente a entender como se hace el cálculo de un CRC de una manera más práctica y sencilla, también se puede copiar y aprovecharlo para otras aplicaciones. Espero que te sea util.
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basE91 is an advanced method for encoding binary data as ASCII characters. It is similar to UUencode or base64, but is more efficient. The overhead produced by basE91 depends on the input data. It amounts at most to 23% and can range down to 14%.
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Java Machine Learning Library is a library of machine learning algorithms and related datasets. Machine learning techniques include: clustering, classification, feature selection, regression, data pre-processing, ensemble learning, voting, ...
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Java·Applied·Geodesy·3D
Least-Squares Adjustment Software for Geodetic Sciences
JAG3D is no longer developed at source-forge, and has moved to GitHub. Please visit https://github.com/applied-geodesy/jag3d or https://software.applied-geodesy.org to get the latest version. -
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Temporal Inference Engine
A real time inference engine for temporal logical specifications
A real time inference engine for temporal logical specifications, which is able to acquire, process and generate any binary or real signal through POSIX IPC, files or UNIX sockets. Specifications of signals and dynamic systems are represented as special graphs and executed in real time, with a predictable sampling time of few milliseconds. Real time signal processing, dynamic system control, state machine modeling and logical property verification are some fields of application of this software. The accepted language provides timed logic and mathematical operators, conditional operators, interval operators, bounded quantifiers and parametrization of signals. -
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Algorithms in Python
Data Structures and Algorithms in Python
Algorithms in Python is a collection of algorithm and data structure implementations (primarily in Python) meant to serve as both learning material and reference code for engineers. It includes code for graph algorithms, heap data structures, stacks, queues, and more — each implemented cleanly so learners can trace logic and adapt for their problems. The repository is particularly useful for people preparing for competitive programming, job interviews, or building a foundational understanding of algorithmic patterns. Because it’s openly maintained, you can browse through issues, see test cases, and observe coding style in a “learning through code” fashion. It also serves as a playground where you can add problems, measure performance, and compare different algorithmic approaches. For anyone striving to move from “I know the syntax” to “I know how to use the right algorithm at the right time,” this repository is a practical asset.
