Search Results for "gel"
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Showing 18 open source projects for "gel"
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pydna
Clone with Python! Data structures for double stranded DNA
Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning. Planning genetic constructs with many parts and assembly steps, such as recombinant metabolic pathways, are often difficult to properly document as is evident from the poor state of documentation in the scientific literature. The pydna python package provide a human-readable formal description of cloning and genetic assembly strategies in Python which... -
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GelJ
GelJ is a Java program for the analysis of DNA gel fingerprints images
...Some of the outstanding features of GelJ are functionality for accurate lane- and band-detection, several methods for computing migration models and generating dendrograms, comparison of banding patterns from different experiments, and database support. Citing GelJ: J. Heras, C. Domínguez, E. Mata, and V. Pascual. GelJ – a tool for analyzing DNA fingerprint gel images. BMC Bioinformatics 2015, 16:270 http://doi.org/10.1186/s12859-015-0703-0. You can see more information about GelJ in https://sourceforge.net/p/gelj/wiki/Home/ Several videos explaining the use of GelJ are available in https://sourceforge.net/p/gelj/wiki/Videos/ Please address any question or comment to joheras at gmail.com -
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MssCF
Mark Stephen Sobkow's Code Factory
...If you can provide a template, it is usually possible to define rules to produce code following the template. The rules themselves use a General Expansion Language (GEL) XML syntax. -
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Gel
A modern gem manager: Gel is a lightweight alternative to Bundler
Gel is a modern gem manager for Ruby, offering a lightweight alternative to Bundler. It focuses on performance and simplicity, providing faster installation and locking of gems. By streamlining dependency management, Gel enhances the efficiency of Ruby project development. -
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gel
Generic Layer Framework for Java Applications
The gel framework provides tools for several functionality purposes in Java (client and server) applications. These tools make the code smaller and simpler by implementing solutions for common functionality and design patterns, mostly related to GUI effects, multithreading and configurability. The framework contains several components that might be used separately according to dependancies. -
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Proteus
Proteus is an interactive Laboratory Journal for Gel-based Proteomics
Proteus is an interactive Laboratory Journal for Gel-based Proteomics. It features integration with the Delta2D software for peak import and annotation export. -
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CaspLab - Comet Assay Software Project Lab is a cross-platform image analysis software to measure level of DNA damage in SCGE (Single Cell Gel Electrophoresis) method called also comet assay method.
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SpeedyQuant
Quantifies DNA, RNA or protein bands in agarose or acrylamid gels.
SpeedyQuant is a gel imaging/analysis software that automatically detects and quantifies gel bands (DNA, RNA, protein) in agarose or acrylamid gels. When calculating the relative strength of each band (% of most prominent band) it takes the background noise into account. This leads to accurate and comparable results. Several options can be used to tune the detection process. -
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The goal of Picklist Editor is to display and modify pick lists before spot picking (in proteomics).
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This program will read in data generated by ABI DNA Analyzers using GeneScan or GeneMapper, CEQ 2000 and SCF instruments and construct gel images which are straightened and sized. Please download and view the tutorial, no documentation is included in 2.1
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This application is a useful tool to convert numeric series (chromatography or mass spectrometry) in a graphic, like SDS page gel or DNA gel to compare it visually. It also includes a database to quickly find matches with user defined profiles.
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GEL is a collection of embedded libraries and examples for 68HC11 and 68HC12 microcontrollers. It provides various embedded libraries like: - a small libc - an event driven library - LCD 128x64 graphical library - robot library
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Annotated Gel Markup Language is a simple markup language that is being proposed to markup data obtained by 2D gel electrophorosis.The goal of AGML is to enable proteomics research move into the browsing mode of searching through existing databases.
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A simple tool for molecular biologists (or similar) to estimate the size of electrophoresis gel bands. This can be applied to SDS-Page-,Native-Protein-, DNA, RNA, *whatever* gels as long as a weight/size standard lane is present on the gel.
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green-home-auto
Smart Home automation Cape Town optomise PV power usage IoT
Smart Home Automation Arduino Mega IoT Rev87 of C++ Start 4 Oct 2016 Cape Town, South Africa 9 x 305W Canadian Solar PV panels Microcare 60A MPPT 8 x Sonic 105Ah Gel Batteries MLT Drives 4KVA Pure Sine Wave inverter Flat Plate thermo syphon solar collector and GeyserWise Aduino Mega , sensors and 8ch relay board .75KW pump with pressure/low level/ overcurrent Annual average daily power usage before PV 7kWh per day Post installation approx 15kWh per day . Payback period approx 5years at 7kWhpd then approx 20years “free power” Work in progress. ...
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