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Willow is a filtering proxy written in Python by Digital Lumber. They disappeared in 2009. David Bowman has collected the code of his old server and released it to Sourceforge in case others would like to use it.
BASILISK is a probabilistic model of the conformational space of amino acid side chains in proteins. Unlike rotamer libraries, BASILISK models the chi angles in continuous space, including the influence of the protein's backbone.
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DANGLE: A Bayesian inferential prediction method for protein backbone dihedral angles and secondary structure assignments, solely from sequence information, experimental chemical shifts and a database of known protein structures and their shifts.
This is a reference implementation of snoBAC, a Bayesian Classifier designed to predict box H/ACA snoRNAs in Caenorhabditis nematode genomes. For details of algorithm and data, see Wang and Ruvinsky (2009) RNA in press.
Projeny (Probablistic Networks Generator in Java) is a graphical (Java SWT) front-end to BNT (Bayes Net Toolbox for Matlab). Projeny requires BNT, JMatLink and a Matlab back-end. There is no installable release package, but source code is available on SVN - please check out from SVN to use Projeny. Projeny was started with BNJ as the base.
JBendge - Bayesian Estimation of Nonlinear Dynamic General Equilibrium Models. The project provides a toolkit together with a graphical user interface for the specification, solution, estimation and simulation of models.
Surfovisor is a content-filtering software for small local networks including
many filters - IP:port black-list, URL black-list, URL white-list, bad word filter, bayesian filtering, file extension filter, application black-list.
The project Environment of Crime is a generic interface to visualize and present social data and crime satistics from Berlin (Germany). Bayesian algorithms are used to extract relevant information.
FoxBAT was made in an attempt to see if Naïve Bayesian filtering commonly used for spam filtering could be employed in the World Wide Web context. The application consists of a Firefox extension (.XPI package) and a Perl server script.
Bayesian Surprise Matlab toolkit is a basic toolkit for computing Bayesian surprise values given a large set of input samples. It is also useful as way of exploring surprise theory. For more information see also: http://ilab.usc.edu/
An implementation of memory-prediction framework applied for image recognition. Based on Jeff Hawkins' book On Intelligence. It models the high-level hierarchical architecture of human neocortex and uses Bayesian belief revision for making predictions
The application Crimeblips provides up-to-date crime statistics for Berlin (Germany). It maps and visualizes crimes, allowing users to identify crime hot spots, trends and general patterns. Bayesian algorithms are used to extract relevant information.
software for identifying modules in networks (e.g. "community detection"), as described in "a bayesian approach to network modularity" (physical review letters 100, 258701 (2008); http://link.aps.org/abstract/PRL/v100/e258701).
QHQ++ is a C++ library includes: QHQc++ (C++ Numerical Library), QHQmcmc++ (Markov Chain Monte Carlo C++ Library, Bayesian Statistics), QHQsv++ (Stochastic Volatility C++ Library, Finance), QHQyc++ (Yield Curve Modeling C++ Library, Finance).
MIM is a Windows program for graphical modelling -that is, the statistical analysis of multivariate data based on graphs. It uses models based on undirected graphs (a.k.a. Markov networks), directed graphs (a.k.a. Bayesian networks) and chain graphs.
Fast, intelligent, automatic spam detector using Paul Graham style Bayesian analysis of word counts in spam and non-spam emails. Filtering adapts to personal tastes automatically. No manual rule creation required. Intended for use with procmail, maild
scmail is a mail filter written in Scheme. scmail can filter an incoming mail when it is received and filter mails in a mailbox. A bayesian spam filter called scbayes is also included.
Linasf is a PHP implementation of a SpamAssassin-like spam filter. It uses Bayesian Filters, User-defined rules and Artificial Neural Networks to obtain excellent results.
Training and integration with current PHP system is very easy. (uses MySQL as DB)
Pop3 Agent is both an email notifier and a client-side spam blocking tool that combines various approaches to filter out unsolicitated commercial email (UCE). Black-/whitelists, naive Bayesian filter and rule based filters are supported.