Search Results for "scientific plotting software" - Page 58
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Showing 5804 open source projects for "scientific plotting software"
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1
ds-Bidens
Software for studying bacterial colony features
Software for studying bacterial colony features: Optical forward-scattering systems supported by image analysis methods are increasingly being used for rapid identification of bacterial colonies. The conventional detection and identification of bacterial colonies comprises a variety of methodologies based on biochemical, serological or DNA/RNA characterization. Such methods involve laborious and time-consuming procedures in order to achieve confirmatory results. The software (ζ-Bidens)... -
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G4LTL-ST
Generating PLC programs from formal specifications
G4LTL-ST is a standalone tool and a Java library for automatically generating industrial control software (supporting IEC-61131-3 Structure Text) from LTL or extended logic specifications. See Tutorial.txt inside the package for step-by-step instructions. For technical demails, see CAV'14 paper "G4LTL-ST: Automatic Generation of PLC Programs". The old version (G4LTL; under BSD license) is available under file\arxiv. -
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VITAMINS
Visual and Insitu Analytics for Molecular Interactive Simulation
A framework to support the high performance analysis and visualisation of molecular dynamics trajectories directly acquired in-situ while the simulation is running, or read from files. Vitamins relies on the FlowVR software and comes with binding with Gromacs. Vitamins (Visual and In Situ Analytics for Molecular Interactive Simulation) is an open source framework for the analysis and visualisation of large molecular dynamics trajectories directly acquired in-situ while the simulation... -
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Marcion
The study environment of ancient languages (Coptic, Greek, Latin)
Marcion is a software forming a study environment of ancient languages (esp. Coptic, Greek, Latin) and providing many tools and resources (dictionaties, grammars, texts). Although Marcion is focused on to study the gnosticism and early christianity, it is an universal library working with various file formats and allowing to collect, organize and backup texts of any kind. Overview of gnostic sources in Coptic language delivered with Marcion: Nag Hammadi Library; Berlin Codex; Codex... -
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LibOpenCIF
A library to load CIF (Caltech Intermediate Form) files.
LibOpenCIF is an open source library for GNU/Linux that bring to the user basic loading of CIF (Caltech Intermediate Form) files. The library is writed and intented to be used in C++. -
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Education Ellie
Learning software for children and autistic
What is? Students with learning difficulties or mental disabilities have knowledge level and teaching methods similar to students in the first cycle of basic education. This software aims to help in the learning of these pupils and students of primary. Why Ellie? Ellie name comes from the software mascot is an owl (symbol of knowledge) red, interacting with people and help using software. Authors and Contributors Originally the software was developed by Pedro Luzio @pedroluzio,... -
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Behaviour Control Framework
A C++ framework that uses inhibition trees for behaviour control.
The Behaviour Control Framework is a generic platform-independent C++ framework that implements a control architecture consisting of a hierarchical network of behaviour layers. These layers each contain behaviours that can inhibit one another and interact to achieve control. A full discussion of the structure and ideas behind this framework can be found in the Doxygen documentation that comes with the release. This documentation is well worth a read before you decide if the library is for... -
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CFD2D
The incompressible Navier-Stokes equations solver in 2D domains
CFD2D is open source software for Linux for solving the non-dimensionalized incompressible Navier-Stokes equations (NSE) inside an arbitrary two-dimensional domain inscribed in a unit square with Dirichlet and "do-nothing" boundary conditions. The space discretization is based on Finite Element Method (FEM) using an approximately uniform triangular mesh. The two choices of FE spaces are offered, these are of the so called MINI-element and of the Taylor-Hood element. The first element... -
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State Controller Library
A C++ framework that implements generalised finite state machines.
The State Controller Library is a generic platform-independent C++ framework that allows finite state machines and multi-action planning generalisations thereof to be realised. The structure and implementation of this library focuses on the application of finite state machines to real-time control loops, but can be reasonably adapted for virtually any other application, even completely unrelated to control systems. An emphasis has been placed on having very low overhead so as not to hurt... -
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Attitude Estimator
A C++ implementation of a nonlinear 3D IMU fusion algorithm.
Attitude Estimator is a generic platform-independent C++ library that implements an IMU sensor fusion algorithm. Up to 3-axis gyroscope, accelerometer and magnetometer data can be processed into a full 3D quaternion orientation estimate, with the use of a nonlinear Passive Complementary Filter. The library is targeted at robotic applications, but is by no means limited to this. Features of the estimator include gyro bias estimation, transient quick learning, multiple estimation algorithms,... -
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YoMo
You Only Meter Once - The open hardware smart metering system
...The smart meters are attached to household devices and monitor their energy consumption. The gathered data is timestamped and transmitted to the coordination device. This device offers interfaces to control the smart meters. On top of the software runs a apache webserver that provides all estimated data on our yomo project homepage. The system does not need any maintenance and works out of the box after the devices were integrated into the households Wi-Fi network. Link to the scientific paper: http://link.springer.com/article/10.1007%2Fs00450-014-0290-8#/page-1 -
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brushless-gimbal-BruGi
Brushless Gimbal Controller for Camera Stabilization
This is a camera stabilization system based on a dedicated controller hardware. The controller software is provided as an Arduino project. A tcl based GUI (graphics user interface) is provided to ease parameter settings and tuning. Brushless Gimbal Controller by Ludwig Färber (Hardware and Software) , Alexander Rehfeldt (Software), Christian Winkler (Software) and Alois Hahn (Software) A good source for instructions and setup issues you find... -
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EasyModbusTCP Server Simulator .NET/JAVA
Modbus TCP/UDP Server Simulator and Modbus RTU Slave Simulator
Modbus TCP Server simulator and library for .NET and Java implementation. See Library and source code: www.easymodbustcp.net For Connection to Modbus-TCP, Modbus-UDP clients, and Modbus RTU Master. Server listens at port 502 (can be changed). Shows also Protocol informations. Allows Multiple connections Digital Inputs; Coils; Input Registers and Holding Registers can be viewed and changed in a table-view Version V2.5: - Upgrade Library with new functions Version V1.1: -... -
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An open-source implementation of our network-based target deconvolution approach, named target addiction score (TAS). License: The TAS R-package is made available under the terms of the GNU General Public License, which means that the source code is freely available for use within other software, but if you alter the code and distribute it, you must make the new source code freely available as well. This software is distributed in the hope that it will be useful, but WITHOUT ANY...
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3D Grapher
Easy-to-use software for plotting functions of two variables.
3D Grapher is a software for plotting functions of two variables. It is a simple, easy to use, GPU accelerated, tool for making various surface plots. Additional requirements: JDK / JRE 8 OpenGL 2+ -
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program.MODULAR
MODULAR: Autonomous Computation of Modularity
MODULAR is a software developed to perform rapid and automatic calculation of modularity in sets of networks. MODULAR reads a set of text files with bipartite or adjacency binary matrices representing networks. The software can identify and define modules by two different modularity metrics widely used in studies with different types of networks such as social, ecological and biochemical networks. In order to find the network partition that maximizes modularity, the software offers five... -
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XParallax viu
Software for automated astrometry
XParallax viu is a free software tool for automated astrometric data reduction of astronomic CCD images. It helps astronomers to perform an accurate astrometric reduction of dozens ore even hundreds of images which can be used in subsequent data analysis process. Fit headers generated by this software are fully compatible with other commonly used image utilities like SAO DS9 or Aladin Sky Atlas. -
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VoynichReader
Voynich Manuscript viewer.
Software for viewing, searching & analysing Prof. Stolfi's interlinear transcription of the Voynich Manuscript. -
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LOOS
Analyze molecular simulation data
LOOS is a light-weight object oriented software library for creating new tools for analyzing molecular simulation data, written in C++. The main design goal is to allow casual programmers to easily implement new analysis methods. THIS PAGE IS NO LONGER UPDATED. Please see https://github.com/GrossfieldLab/loos for all recent developments -
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Visualization of Protein-Ligand Graphs
Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools
NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/ -
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Toastpp
Forward and inverse modelling in optical tomography
Toast++ is a C++ software package for modelling light transport in scattering media using the finite element method. It allows 3D reconstruction of absorption and scattering distributions inside an object from boundary measurements of light transmission, using steady state, time domain or frequency domain information. Matlab and Python bindings exist for ease of use and fast prototyping. -
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Opt4J
Modular Java framework for meta-heuristic optimization
Opt4J is an open source Java-based framework for evolutionary computation. It contains a set of (multi-objective) optimization algorithms such as evolutionary algorithms (including SPEA2 and NSGA2), differential evolution, particle swarm optimization, and simulated annealing. The benchmarks that are included comprise ZDT, DTLZ, WFG, and the knapsack problem. The goal of Opt4J is to simplify the evolutionary optimization of user-defined problems as well as the implementation of arbitrary... -
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Yggdrasill
3D Evolutionary Tree Visualization
Yggdrasill is a 3D phylogenetic tree visualization software based on the Unity 5 engine. Intended for educational and scientific purposes this demonstration release allows to display and explore evolutionary relationships between different terrestrial vertebrate species. Currently available features include procedural tree generation of evolutionary data provided by the Tree of Life (ToL) Web Project (http://tolweb.org/tree/), full three dimensional camera controls as well as a web search, an extinct species overlay and more. ... -
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VCF Explorer
A desktop application for analyzing whole genome VCF files
he decreasing cost high-throughput technologies led to a number of sequencing projects consisting thousands of whole genomes. The paradigm shift from exome to whole genome brings a significant increase in the size of output files. Most of the existing tools which are developed to analyze exome files are not adequate for large VCF files produced by whole genome studies. In this work we present VCF-Explorer, a variant analysis software capable of handling large files. Efficient memory... -
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MS2Browser
LC-MS/MS data browser designed for siderophore analysis
MS2Browser is a tool for interactive pre-processing, analysis and visualization of LC-MS/MS data. Input is an mzXML file with centroided LC-MS/MS data. The program is written in MatLab and it was designed for the analysis of siderophores (iron transporting small molecules) in bacterial media. Some of the functionality and use of MS2Browser is described as part as an open-access book...
