Search Results for "snp" - Page 5
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Showing 120 open source projects for "snp"
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HubSpot is an AI-powered customer platform with all the software, integrations, and resources you need to connect your marketing, sales, and customer service. HubSpot's connected platform enables you to grow your business faster by focusing on what matters most: your customers.
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HubSpot is an AI-powered customer platform with all the software, integrations, and resources you need to connect your marketing, sales, and customer service. HubSpot's connected platform enables you to grow your business faster by focusing on what matters most: your customers.
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Utility to convert PED genome file into RAW SNP format. Creates multiple files per person. Supports big files. The same conversion utility has been included into "aisconvert" toolkit, so this project is rather deprecated.
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Genevar (GENe Expression VARiation) is a platform of database and web services for the integrative analysis and visulization of SNP-gene assocaitaions in eQTL studies.
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The SNP ratio test can assess significance of enrichment of significant associations in genome-wide association studies. Tests can be applied to pathways such as KEGG/GO, or user-defined pathways to test specific hypotheses. See link below for more.
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Simplify every aspect of buying for your business in Order.co. From sourcing products to scaling purchasing across locations to automating your AP and approvals workstreams, Order.co is the platform of choice for growing businesses.
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SNP Monitor! is a tool that allow to: - connect to GE Fanuc PLC, - view and edit values of variables, - write PLC memory to MySQL database, - read values from database and write them to PLC memory, - build free Human Machine Interface using web pages.
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A collection of applications for epistatic detection in genome-wide data. With user-provided genotype and phenotype data, as well as a few parameters, the applications are able to return the significant SNP-pairs.
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This is a Perl module for doing snp analysis based on shotgun sequencing reads and a reference genome sequence. Its primary input is the cigar alignment format outputted from ssaha2.
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The annotation files for Illumina SNP genotyping platforms generated for performing Homozygosity Haplotype analysis
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KrakenD is a high-performance API Gateway optimized for resource efficiency, capable of managing 70,000 requests per second on a single instance. The stateless architecture allows for straightforward, linear scalability, eliminating the need for complex coordination or database maintenance.
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Avenzoar is a one-year exploration of renal cell carcinoma morphology and its related single nucleotide polymorphisms (SNPa) as a method of automating diagnosis of cancer by using a computer-aided decision tree controlled by analytical statistics.
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This software implements a method we recently developed (ADT) that analyzes cancer SNP array data in a novel manner to detect nucleotide alleles and haplotypes selected for amplification in recurrently amplified regions across tumors samples.
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openADAM is a web-based database management system for the large amount of genotype data generated from the Affymetrix GeneChip® Mapping Array and Genome-Wide Human SNP Array platforms
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A program to model HapMap haplotypes in genetic association studies using tag SNP genotypes. Please visit http://www.ucd.ie/genepi/hapmixmap for more details.
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SNPMATIC (SNP MicroArray Training, Inference and Classification) is a tool for SNP genotype analysis of Affymetrix SNP Microarrays. It is in the early stages of development and it is expected that interest will be limited mainly to developers for now.
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HapSnap computes common haplotypes in a human population from SNP allele frequency. Its main advantage over genetype-based haplotype estimation is speed, both in terms of molecular data generation and computation. Its main drawback is reduced accuracy.
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MAGMA: Multiobjective Analyzer for Genetic Marker Acquisition A genetic algorithm for generating SNP tiling paths from a large SNP database based on the competing objectives of cost (number of SNPs) and coverage (haplotype blocks): Hubley R., Zitzler
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OncoSNP is a computational method for the identification of copy number alterations and loss-of-heterozygosity in heterogeneous tumour samples from Illumina SNP genotyping data.
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DawgPack is an ultra-fast, Cloud-based tool that maps many high coverage genomes and performs analysis to find clues for pathogenesis. It will integrate CNV, SNP, RNA-Seq and ChIP-Seq analyses.