Search Results for "gap" - Page 5
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Showing 233 open source projects for "gap"
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Bright Data - All in One Platform for Proxies and Web ScrapingBright Data offers the highest quality proxies with automated session management, IP rotation, and advanced web unlocking technology. Enjoy reliable, fast performance with easy integration, a user-friendly dashboard, and enterprise-grade scaling. Powered by ethically-sourced residential IPs for seamless web scraping.
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FolderEncrypted
Create and manipulate Encrypted Folders as easaly as Zip folders
It has become common place to use compressed formats to bunch files and folders together to transport and store. The Zip format works great for the everyday user, but up till now Encryption has been something that only some have been able to master. This project is here to close that gap. The end user needs to be able to protect his/her sensitive data. FolderEncrypted will only allow people be able to read sensitive data if they can provide the encryption key, but once the correct key... -
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wmtsa-python
Discrete wavelet methods for time series analysis using python
Several python libraries implement discrete wavelet transforms. However, none of them, or at least none that I know, is aimed at scientific use. This library aims at filling this gap, in particular considering discrete wavelet transform as described by Percival and Walden. This module started as translation of the wmtsa Matlab toolbox (http://www.atmos.washington.edu/~wmtsa/), so most naming conventions and most of the code structure follows their choices. The code uses a mix of python... -
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browser.js
A Javascript library to detect various browser properties
browser.js is a Javascript library to detect specifics concerning the users browser. Instead of trying to figure out yourself what every browser yourself, get a nice array layout of properties using browser.js. The project isn't public yet. The website is not yet complete and will now take you to the projects main website as the development website is under construction. The following web browsers can be detected using the script. Note that this is a Technical Alpha and the gap... -
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AFSM_seq
a simple and rapid method for genome-wide SNP and methylation site
... aligned to the reference genome using the Bowtie2, allowing a maximum of four mismatches and one gap of up to 3 bp. Using the SAMtools pileup command the variable positions (SNPs) were determined. 5.AFSM_meth_V_1.0.pl are used for analyses of AFSM methylation results were based on comparisons of assembled sequences . perl AFSM_meth_V_1.0.pl -i output.sort.bam -o output.meth.matrix -
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Multiple Dates Picker for jQuery UI
[Project moved to GitHub]
Extends jQuery UI's datepicker (calendar) allowing multiple dates and range selection and avoidance. -
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xPyder PyMOL Plugin
Analyze and visualize coupled residues and their networks in proteins
... using a modular, user-expandable plugin system that takes advantage of structural and dynamical information, contributing to bridge the gap between dynamical and mechanical properties at the molecular level. -
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GenomicVis
Genomic data visualisation
... formats such as VCFs and from common software tools such as GAP and Breakdancer -
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VarImpact
Extracting effects of mutations on molecular properties from text.
... ranging from alteration of active sites to changes in drug response resulting. Our aim is to bridge the gap between detection of genetic variants and their annotation with aforementioned observations. VarImpact extracts experimentally observed changes from the literature. This allows to annotate sequencing results with observed impacts, gather information about the mutational landscape observed in disease populations, and to study disease mechanisms. Check our Wiki for more! -
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MARAGAP
MARAGAP - Modular Approach to Reference Assisted Genome Assembly Pi...
This paper presents `MARAGAP', a reference assisted genome assembly pipeline. MARAGAP uses the principle of Minimum Description Length to determine the optimal reference sequence for the assembly. The optimal reference sequence is used as a template to infer inversions, insertions, deletions and SNPs in the target genome. MARAGAP uses an algorithmic approach to detect and correct inversions and deletions, a De-Bruijn graph based approach to infer the insertions, an affine-match affine-gap local... -
A new approach to fast data transfer | IBM AsperaIBM Aspera takes a different approach to tackling the challenges of big data movement over global WANs. Rather than optimize or accelerate data transfer, Aspera eliminates underlying bottlenecks by using a breakthrough transport technology that fully utilizes available network bandwidth to maximize speed and quickly scale up with no theoretical limit.
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ReSPARQL - RecSPARQL
SPARQL extension for recommendations
SPARQL, a declarative query language for querying RDF-graphs, supports retrieval of data exclusively based on facts; in contrast Recommender Systems aim to predict the taste of a user towards a set of not consumed items. However, predictions or suggestions are entities that cannot be explicitly retrieved. ReSPARQL is an extension of SPARQL that fills the gap between this two paradigms and enables a generic and flexible approach for recommendations over arbitrary RDF-graphs. It supports content... -
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NereCode
A stand-alone PHP-only library for parsing BBCode-like tags
Since BBCode requires much trouble to get it running, and not every project needs something so solid (sometimes it's just a admin posting engine, or a small microblogging engine with little or no user-content injections). NereCode comes to aim such gap. A minimally comprehensive syntax easily customizable. PHP only. Single file library. -
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mqttrepeater
Mqttrepeater act as a one way proxy between a mqtt broker and emoncms
Mqttrepeater is a python module to bridge the gap between a mqtt broker and an emoncms instance -
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... musicians to connect, but what about the fans? A cheap pair of headphones is no match to the feelings you get when you can see new, innovative talent performing right in front of you. There’s a gap in the market, and we’re here to fill it.
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AnsiGL
A modern "graphics" API for text-based applications
... tend to either use video hardware, or are simply not as fully-featured as one might hope or expect, at least in the area of visual elements. AnsiGL can serve to bridge that gap easier, and since it "renders" to a std::string (or optionally, an ncurses WINDOW *), integration should be relatively easy with just about any project. Bindings to ncurses are provided to allow for rapid, fully-featured application development with old and familiar friends, along with AnsiGL. -
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brimbox
PHP/Postgres Web Database Interface
Brimbox is an easy to install web based relational database designed to bridge the gap between spreadsheets and custom designed databases. It is easy to customize and deploy, and is a tool for the PHP/Postgres/LAMP stack community when working with data sets or databases. -
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Gapfinder
Gapfinder is used to localize GAPS in DNA sequences
... contigs ) that remain to be filled. GAPFINDER was created to help biologists in this last "gap filling" step. User can easily: - localize GAP's positions and save them as TABLE or as ANNOTATED GENBANK which can be loaded in genome browsers such as Artemis, etc. - extract GAP's neighbouring sequences, which is very helpful in primer walking and GAP filling process. Gapfinder was implemented in C++ with the use of Qt framework -
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Scertify - TechDebt Community
Benchmark code quality and measure Technical Debt of projects in Sonar
... able to effectively addressing these needs: * How to understand quality indicators, and how to compare them with the state of the art? * How to measure and manage the gap between the absolute quality level of a software, and a reasonable (reachable) target of quality? * What are the shortest and safe ways to achieve your quality goals? -
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FinIS
An in silico genome finishing tool
FinIS allows users to close gaps in the genome assembly as well as validate the genomic scaffold. It considers all gaps simultaneously to find gap sequences that best match the read data and to correctly resolve repeats. For further details see the FinIS webpage and the publication describing FinIS. -
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HBase - Hannibal
Monitor and maintain HBase configured for manual splitting
Hannibal is a tool to help monitor and maintain HBase-Clusters that are configured for manual splitting. While HBase provides metrics to monitor overall cluster health via JMX or Ganglia, it lacks the ability to monitor single regions in an easy way. This information is essential when your cluster is configured for manual splits, especially when the data growth is not uniform. This tool tries to fill that gap by answering the following questions: How well are regions balanced over... -
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... regarding both computing servers and user workloads. To fill this gap in tools for evaluation and modeling of Cloud environments and applica- tions, we propose CloudSched. CloudSched can help developers identify and explore appropriate solutions considering different resource scheduling algorithms. Unlike traditional scheduling algorithms considering only one factor such as CPU, which can cause hotspots or bottlenecks in many cases, CloudSched treats multi-dimensional resource such as CPU, memoryt
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Big Sack
Big Sack: A lightweight Java Key/Value store with undo and disk cache.
Big Sack is a Java persistence mechanism that allows storage of key value pairs following the popular Big Data paradigms. Its a very simple and straightforward way to bridge the gap between in-memory data structures and long-term storage. It has the convenience of Java SDK TreeMap and TreeSet classes and is used the same easy way, but it includes rollback through undo logging to checkpoint data so it does not wind up in an unknown state regardless of failures. Data storage in the exabyte range... -
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IMAGE stands for Iterative Mapping and Assembly for Gap Elimination. It is a software designed to close gaps in any draft assembly using Illumina paired end reads.
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The goal of this project is to combine different sources of information as well as methods to help in the process of gap closing / genome finishing in high throughput sequencing.
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Unified Help Desk
Power Through Unification.
In a world where technology is ever increasing, and the demand for IT support continues to grow, there must be some common ground between IT Technicians and End Users... Welcome to Unified Help Desk. Closing the gap between the computer literate, and stone age employees. With a fully interactive Knowledge Support Database providing wiki's for your users, Help Desk Support Center for those users that require assistance, and a powerful Asset Management System, Unified Help Desk brings you, your... -
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MewsicPlayer
Player for files and Youtube Videos
Resulting from the poor youtube playlist feature this player tries to bridge the gap between classic audio file players and the huge amount of music videos on Youtube.