Search Results for "algorithm" - Page 49
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Showing 2782 open source projects for "algorithm"
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Graphal
Graph algorithms interpreter, IDE, debugger, 3D visualizations.
Graphal is an interpreter of a programming language that is mainly oriented to graph algorithms. There is a command line interpreter and a graphical integrated development environment. The IDE contains text editor for programmers, compilation and script output, advanced debugger and visualization window. The progress of the interpreted and debugged graph algorithm can be displayed in 3D scene. -
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VariantMaster
Extract causative variants for monogenic and sporadic genetic diseases
There is a fast growing interest in clinical genetics to the utilization of High Throughput Sequencing data for accurate diagnosis of monogenic diseases. To improve the identification of the variants from HTS, we developed VariantMaster, an original program that accurately and efficiently extracts causative variants in familial and sporadic genetic diseases. The algorithm takes into account predicted variants (SNPs and indels) in affected individuals or tumor samples and utilizes the row (BAM... -
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A pure C library translated from C++ Standard Template Library(STL), intended to be used as a STL like(container + iterator + algorithm) library in any C compatible environment.
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KL1p
A portable C++ library for Compressed Sensing
KL1p is a portable C++ framework for handling sparse recovery of inverse problems of underdetermined linear systems, like in compressed sensing technique. -
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Simplex-ADM1
Simplex-Algorithm
Implementation of the Simplex-Algorithm for algorithmic discrete mathematics 1 at the TU Berlin. -
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JCycles
[frozen] A library for computing cycles in graphs or in Java code.
[This project is frozen, but has an offspring with more features: https://github.com/jeffhain/jadecy ] JCycles provides treatments to compute cycles, or just strongly connected components, in directed graphs in general, or in classes or packages dependencies graphs parsed from class files (major version <= 51, else does best effort). It uses Tarjan's algorithm for SCCs, and Johnson's for cycles, with continuations instead of recursion, which allows to handle large graphs -
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gcdTool
Small program finds gcd of two integers using euclidean algorithm.
This program uses the euclidean algorithm to find the gcd of two given integers a, and b. -
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StabLe
An algorithm for learning stable graphical models from data
Stable Graphical Model Learning (StabLe) is an algorithm for learning the structure and parameters of stable graphical (SG) models from data. Stable random variables are motivated by the central limit theorem for densities with (potentially) unbounded variance and can be thought of as natural generalizations of the Gaussian distribution to skewed and heavy-tailed phenomenon. SG models are multi-variate stable distributions that represent Bayesian networks whose edges encode linear... -
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FALCON - Text Search Java Project
JSON based text search Java Project
----------------- - What is it? - ----------------- The "Falcon Search" is a JAVA API and tool to search inside the documents. It was originally started to search the content in pdf files under the project "HAWK Search". Searching with this tool is query-based not word-based as in most of the document search tools OR document readers. It also takes care of jumbling of words within query and spelling mistakes. Commonly used techniques in this project are Natural Language... -
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Job Crawler
Job Data Collection - Web Crawler
... on these figures, and performs a detailed analysis for the employment situation of the states of the USA. What is the hot job in your state? This report is going to explain how to design and implement solution for Job data collection system. It also includes some links for source code, class diagram, algorithm -
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DTMF detector and generator. Was used standard C++,so DTMF detector and generator completely cross platform.It used robust and reliable fixed-point algorithm, so can fast work on fixed-point architecture.
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CPS StopWatch
A little stopwatch to manage your time
... with available time (Kleiton Santos) + 2.5.2 - Layout fix on report window (Tiago_Farias) - Auto PIN and double click on PIN button FIX (Fabiano_Ferreira) + 2.5 - Added Configuration Possibility - Added button to Configuration on Main Screen - Added Information Button on Main Screen - Improved time algorithm - Utilization of a Config.ini file to save personalizated settings. + 2.4.1 - Removed minimize button from main window - Fixed sound on last 20 seconds when using Windo -
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libcontc
Container library in C.
About Collection of data structures and operations that have been (and will continue to be) implemented in response to need. Container interface, naming and behavior is similar to the STL containers. Algorithm interface is in the spirit of the C standard library search and sort functions. Compatibility ISO C99, ISO C++98, ISO C++11. Performance These are designed to be general purpose, and reasonably efficient in most circumstances. Notes The biggest problem with these is type... -
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CalPCS
A pitch class set analyzer.
CalPCS is a free pitch class set calculator software. System requeriments: Java Runtime Environment 1.6 or above. Screen of at least 800x600px. Optional: A Java Sound Bank. The program displays for each set their normal order, classification, transposition, whether it is an inversion, prime form, interval vector and the invariant property. -
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cmotif
A method for mining conditional phosphorylation motifs
Phosphorylation motifs represent position-specific amino acid patterns around the phosphorylation sites in the set of phosphopeptides. The discovery of phosphorylation motifs is a very valuable work in bioinformatics. Although several algorithms have been proposed to uncover phosphorylation motifs, the problem of efficiently discovering a set of significant motifs with sufficiently high coverage and non-redundancy still remains unsolved. In this paper, we propose an algorithm called C-Motif... -
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Pepgrep
Tool for peptide MS2 pattern matching in MS tandem dataset
pepgrep offers a quick and friendly way to examine MS tandem output data by finding a spectral pattern matching selected peptide sequence. It is database-free command-line utility that uses Peptide-to-MS2 scoring algorithm. The Peptide-to-MS2 pattern matching can accumulate dozens of mass offsets corresponding to a variety of Post-Translational Modifications. Decoy peptide sequences are used with the tested peptide sequence to reduce false-positive results. Read article at: http... -
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JConstraints
Java Framework to implement solutions to solve constraints problems
... of Backjumping algorithms; - A variety of arc-consistency algorithms; - Local search algorithm; - Tabu search algorithm; - Maximize solutions: comming soon; - Minimize solutions: comming soon; The Framework also enables heuristic injections so that the developers can achieve greater performance of algorithms using their own heuristics. Version 1.0: Released! Version 1.1: Coming soon See the tutorial in the Wiki page to learn how to use this Framework. -
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HRSS
Hybrid Relative Specificity Similarity based on Gene Ontology
This software provides a hybrid GO-based semantic similarity algorithm for evaluating the functional similarity between GO terms or gene products. The software uses the pre-downloaded GO database files and the GO annotation files. It allows the users to set organisms, and evidence codes ignored. The software is composed of five modules, getGODAG, getGOAnno, hrssmatrix, hrsstps and hrsspps. -
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Basic PGM Editor
Basic PGM Editor using C++
.... As I look further into Algorithm Design, there might be a chance for upgrading the current algorithm and to provide multi-threaded support. -
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ProximityForest
Efficient Approximate Nearest Neighbors for General Metric Spaces
A proximity forest is a data structure that allows for efficient computation of approximate nearest neighbors of arbitrary data elements in a metric space. See: O'Hara and Draper, "Are You Using the Right Approximate Nearest Neighbor Algorithm?", WACV 2013 (best student paper award). One application of a ProximityForest is given in the following CVPR publication: Stephen O'Hara and Bruce A. Draper, "Scalable Action Recognition with a Subspace Forest," IEEE Conference on Computer Vision... -
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algorithmic trading testing
Testing framework for structures regarding performance.
... to algorithm is essential. Operations on structures (beside i/o operations - persistance as well as network communication) are typical places when improvements in performance should be looked for. When analyzing this kind of operations typically following things should be thorougly analyzed: - adding elements - getting / searching elements - removing elements Additionally it's crucial how the structure behaves in multithreaded environment (locking). That's first to algorithmic trading. -
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constrainedLATIN
A one-dimensional implementation of a constrained LATIN method
constrainedLATIN illustrates a simple one-dimensional implementation of a constrained LATIN method for modelling quasi-brittle failure. Unlike classical LATIN methods, this novel algorithm can trace snap-back responses. Reference B. Vandoren, K. De Proft, A. Simone, and L. J. Sluys. A novel constrained LArge Time INcrement method for modelling quasi-brittle failure. Computer Methods in Applied Mechanics and Engineering, 265:148-162, 2013 -
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algo_AHRS_dll
S.O.H. Madgwick's AHRS algorithm encapsulated in a .dll file
This is a windows DLL of S.O.H. Madgwick's AHRS algorithm. Original code can be found at: http://www.x-io.co.uk/open-source-imu-and-ahrs-algorithms/ -
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Maximum Gene Support Tree Approach
Maximum Gene-Support Tree Approach to Infer-ring a Spec
GeneSupport implements a genome-scale algorithm: Maximum Gene-Support Tree to estimate species tree from gene trees based on multilocus sequences. It provides a new option for multiple genes to infer species tree. It is incorporated into popular phylogentic program: PHYLIP package with the same usage and user interface. It is suitable for phylogenetic methods including not only Baysian, but also maximum parsimony, maximum likelihood, neighbour-joining and so on. These methods are used... -
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yetris
Customizable Tetris(tm) clone on the terminal
yetris is a customizable Tetris(tm) clone for the terminal. It has some features found on modern adaptations and aims to please both casual players and Tetris(tm) enthusiasts. It has full textual interface. yetris was originally developed in C, now reprogrammed in C++ with ncurses. It runs on pretty much every terminal around here, but it's limited to POSIX systems.
