Search Results for "algorithm" - Page 39
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Showing 2780 open source projects for "algorithm"
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SWAPHI-LS: Alignment on Xeon Phi Cluster
Smith-Waterman long DNA sequence alignment on Xeon Phi clusters
The first parallel Smith-Waterman algorithm exploiting Intel Xeon Phi clusters to accelerate the alignment of long DNA sequences. This algorithm is written in C++ (with a set of SIMD intrinsic extensions), OpenMP and MPI. The performance evaluation revealed that our algorithm achieves very stable performance, and yields a performance of up to 30.1 GCUPS on a single Xeon Phi and up to 111.4 GCUPS on four Xeon Phis sharing a host. -
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yet another sudoku solver. This one is 100% mine: the algorithm is mine, I didn't make any search before I implemented it.
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vvq: image compression for CADRG in C++
Research/Implementation of an image compression algorithm for CADRG
Georeferenced image databases use a lot of space when stored in raw format. Compressed images require a valuable processing power when read in onboard computers in civilian and military vehicles and aircraft. CADRG standard was created to solve both problems and requires an image compressed using vectorial quantization and color palette. This is an open source implementation to compress an image with the parameters specified in the CADRG standard. -
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AESA
All-purpose Encryption and Security Adaptation
Starting as a personal study project, I have decided to share this security project. For now, it is a JAVA program that can be used to encrypt and decrypt simple file content (ie files), possibly later evolving into a utility with user interface and/or a library -
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Pascal's Canvas
Expanding Pascal's Triangle like structures in 2D
Alg entry is simplified by being able to choose from 21 preset algs. Or, they may be adjusted or entered from scratch. Six different "Pascalloid" output modes allow the data to be graphically explored and browsed. Help is self-contained. Now there is a way to copy data from the output into the clipboard, and to paste tab-deliniated data from the clipboard to make an algorithm. -
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cypher
My own encryption keyword based algorithm to store passwords
My own encryption keyword based algorithm to store passwords and encrypt text -
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Oxe is a web application that enables network monitoring. It is built on a service-oriented and a demon that uses the round robin algorithm for monitoring architecture. Written in Java GPL v3 license.
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cusAPV
customized Asymmetric Pseudo-Voigt Model
A new peak detection algorithm for MALDI mass spectrometry data based on a customized Asymmetric Pseudo-Voigt model -
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Implementation of Kohonen 's algorithm for mapping colors randomly generated after the 3 basic components: red, green and blue in C#
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The project objective is the development of an optimization algorithm for the problem of stowing general cargo into platform supply vessels.
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magmaNeighbours
Lattice-Algorithms in MAGMA
Two-Neighbours Genus Symbol Rational Maß Reflective Lattices -
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HeaDDaCHe
Hashed dynamic determinants for convex hulls
Description: We propose and implement in C++ the hashed dynamic determinants scheme. This consists of efficient implementations of dynamic determinant algorithms and a hash table that stores intermediate results (matrices and determinants) in order to be used in subsequent steps of the algorithm. Related papers: V.Fisikopoulos, L.Peñaranda. Faster Geometric Algorithms via Dynamic Determinant Computation. In Algorithms – ESA 2012, Lecture Notes in Computer Science Volume 7501, 2012... -
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Student software project: RAP (Resolution of Anaphora Procedure) for German Re-implementation of the algorithm of Lappin & Leass for the anaphora resolution for the German language. The description of the algorithm is to be found here. The program was tested on the Tübingen Treebank of Written German and achieved 0.65 F-measure. For the purpose of testing, there is an example test package with configuration file, simple input and output files Slides (in German) and complete summary...
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SharpNEAT is an optimised, neuro-evolution framework written in C#. Included is a front-end GUI, a number of example problem domains and some additional applications for viewing and simulating evolved networks.
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Simple File Manager
A simple file manager especially for flash disks
It is a simple software implemented with Java. The running environment is Java SE8, with some features of Javafx to improve the UI appearance. -
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X-Crypt is a user friendly data encryption application. It allows you to encrypt sensitive data like credit card information into an unreadable format, this is done using a password, the more complicated the better. X-Crypt can encrypt whole files or just some text. The encryption algorithm is very complex and has guaranteed security.
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Open Postcode
Geolocation Postcode Algorithm
A geolocation code for Ireland and elsewhere. Fully extensible. Encoding coordinates into single base-25 characters. -
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RT-alignment
Graph-based time alignment algorithms for multiple LC-MS datasets
... changes under different conditions. The main challenge in this task lies in correcting retention time shifts, which are inevitable even on the same instrument and under the same elution conditions. For large-scale studies, multiple instruments or multi-week experiments are often required, which exacerbates the problem. We present a new graph-based time alignment algorithm that can align these less similar LC-MS maps, which cannot be effectively handled by existing methods. -
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SWAPHI: Smith-Waterman on Intel Xeon Phi
The first protein sequence database search on shared-host Xeon Phis
The first parallel algorithm to accelerate the Smith-Waterman protein database search on shared-host multiple Intel Xeon Phi coprocessors. By searching against the UniProtKB/TrEMBL database, SWAPHI achieves a performance of up to 58.8 billion cell updates per second (GCUPS) on a single Xeon Phi and up to 228.4 GCUPS on four Xeon Phis. -
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Czarcoin
Autonomous Distributed Representation
Czarcoin is a lite version of Bitcoin using scrypt as a proof-of-work algorithm. 128 Second block targets Subsidy is Governed by Production Targets Transaction Focused Network Minimal Creation of New Coins 1% Inflation Target Supply Information posted to https://czarcoin.co/supply.json 100 Blocks to Retarget Difficulty For more information, as well as an immediately useable, binary version of the Czarcoin client sofware, see https://czarcoin.co. -
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Tetcoin
The Currency for Change
Tetcoin is a lite version of Bitcoin using scrypt as a proof-of-work algorithm. ~128 million total coins Pure mining distribution with no premine or ICO 4 minute block targets Starting reward of 128 coins per block subsidy halves in 544k blocks (~4 years) Hourly Difficulty Retargeting Merged Mining Support Enabled For more information, as well as an immediately useable, binary version of the Tetcoin client sofware, see http://tetcoin.co. -
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Java CoreWars Evolver
A Java based, pMars compatible, CoreWars simulator with GA
A Java based, pMars compatible, CoreWars simulator with Genetic Algorithm warrior evolver functionality. Java 8 is needed. See [Wiki:Tutorial] -
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CUDAlign
CUDAlign is a tool that aligns huge DNA sequences in CUDA capable GPUs
CUDAlign is a tool able to align pairwise DNA sequences of unrestricted size in CUDA GPUs, using the Smith-Waterman algorithm combined with Myers-Miller. It produces the optimal alignment of 1 million base sequences in 45 seconds using a GTX 560 Ti. Many optimizations are being developed for this software. Look at the following papers for detailed information: [1] Edans Sandes, Alba Melo. Retrieving Smith-Waterman Alignments with Optimizations for Megabase Biological Sequences using GPU. IEEE... -
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jasuso
Sudoku solver in Java
This is a basic Sudoko solver written in Java using JavaFX and FXML. The solver uses a basic recursive backtrack algorithm. -
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imageCompressor
Compress image by using Generalized Hebbian Algorithm
