Search Results for "smith" - Page 3

Swift is a DNA sequence alignment program that produces gapped alignment using the Smith-Waterman algorithm. It takes in a query file (FASTA format) and a reference file (FASTA format) as input. It outputs the reference name, read name, gapped alignment, alignment score, alignment start and end positions, and alignment length. I gave a talk on Swift in the GPU Technology Conference 2012. The talk can be accessed at http://www.gputechconf.com/gtcnew/on-demand-GTC.php?

...Besides the normal 16-colour Spectrum screen, it can also produce 64-colour ULAplus images. The ULAplus is a plug-in replacement for the ZX Spectrum ULA, and is developed by Chris Smith (see http://www.zxdesign.info/ ). Since version 0.18 it has a user-friendly GUI based on GTK+.

...Included are quality control, read demultiplexing and microbiome characterisation scripts for use with usearch, pplacer and RDP classifier. The package was used to produce the data presented in Smith et al. (2012) "The Cervical Microbiome over 7 Years and a Comparison of Methods for its Characterization".

MOVED TO GITHUB: https://github.com/noporpoise/seq-align An implementation of the Smith-Waterman local sequence alignment algorithm. See our sister project global alignment using Needleman-Wunsch: http://sourceforge.net/projects/needlemanwunsch/

JFinisher is software for alignment, editing and manipulation of biological sequences. It aims to assist in the finishing of genome assembly. Starting from a reference sequence, the program align contigs using Smith-Waterman local alignment algoritm with auxiliary methods, allowing management of the alignments generated. It has graphical interface for manipulation and visualization of the actions, uniting features that help in editing the sequences. It has internal projects manageable and ability to export results in the standard formats of the area.

Free-EOS est une solution "clés en mains" de serveur francophone Intranet/Internet ouvert, destiné aux entreprises ou espaces multimédia (EOF, EPN, Cybercommune, etc.). Basée sur Linux et e-smith, elle gère des postes Windows, Linux ou MacOS.

A javascript calendar control for web client development. The interaction is inspired by windows system calendar selector. It is tiny, pure javascript, easy to use, and control style by css.

Smith is an powerful scriptlanguare witch is still in development. Smith has an own IDE and is at the moment only available for Linux It will be full Integrated into Lazarus for more power. For more Information see the Wiki: http://smith.akaikee.de

A simple javascript version of Smith Html Editor for web client. It is very tiny and have most functions done. And currently it works fine in Chrome and IE7+.

A log anomaly detector tool which uses a modified Smith Waterman algorithm to identify matching (or non-matching) messages, against archived syslog messages in real time.

Smith-Waterman algorithm implementation on CPU, GPU and FPGA.

Java implementation of the most commonly used algorithms for exact string matching, where the pattern is given first.

This is a small program to show impedances in a Smith Chart. The chart is drawn (it is not an image), so it can be redimensioned without pixeling. As it's done with Qt 4, it should run in multiple platforms.

Multi-functional batch sequence aligner incorporating Needleman-Wunsch, Smith-Waterman and Oommen-Kashyap algorithms along with compound alignment of secondary sequences.

Abstracts developers from SQL syntax, with methods that return Strings to pass on to JDBC, thus allowing compile-time checking for, many, otherwise run-time bugs. e.g. stmt.executeQuery(SqlWrapper.selectId(ordersTable, customerColumn, "John Smith")

An efficient implementation of the Smith-Waterman algorithm that takes advantage of SIMD instruction sets in modern CPUs. The Smith-Waterman algorithm is used for sequence alignment in bioinformatics.

Yet Another Lode Runner is a remake of the classical Lode Runner game (1983 by Douglas E. Smith).

Math Wizard is a group of math equation solvers. The programs included with Math Wizard are coded by Connor Smith.

An implementation of the smith-waterman algorithm on the cell broadband engine.

This application takes a image file (jpg, png, gif, bmp) and creates a swatch file with the most common colors. This swatch file is compatible with Smith Micro's Anime Studio 2-d animation software.

Smith is an open source, cross-platform ColdFusion® engine, written entirely in Java. Running on top of Java Runtime Environment and Java Servlet Container, it can be deployed virtually on any operating system and work with any web server.

This application authenticates data from network by creating a short password from all transferred bytes which can be manually compared. Based on a paper by Moni Naor, Gil Segev and Adam Smith. See www.wisdom.weizmann.ac.il/~gils/papers/TightBounds.pdf

The Koozali SME Server is the open source community side of the original e-smith server. SME Server consists of a modified Red Hat / CentOS Linux installation, together with a number of server applications as well as the server management web panel. Its strengths are its ease to use for anyone able to use a web interface, and its robustness, giving the ability to recover its initial state even after any upgrade.

QDura Code Generator is a template based code generator for VB.NET 2.0. The template requires Code Smith to run, and will output all the requred data access layer and most of the business layer, as derived from the schema of the MS SQL database.

Stop searching for your notes on that interesting book written by some person called Smith - now they're only a few clicks away. BibWorm is your complete research management tool, bringing together your bibliographical data and your documents/notes.