Search Results for "correlation" - Page 2
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Showing 200 open source projects for "correlation"
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XLibraryDisplay
A sequence analysis tool for protein engineering
XLibraryDisplay is an intuitive sequence analysis program optimized for protein engineering. It is ideal for all directed evolution platforms including phage, ribosome, and yeast display. Analysis can be quickly done on hundreds to thousands of sequences. Best suited for Sanger sequencing. Requirements: Microsoft Windows XP, 7, 8, or 10 and Excel 2007, 2010, 2013, or 2016 Described in Stafford et al JCIM 2014: http://pubs.acs.org/doi/abs/10.1021/ci500362s -
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StatAnt
The cross-platform package for statistical data analysis
The high performance open source package for statistical data analysis StatAnt is a standalone cross-platform application. Completely free. No donation required. StatAnt comes with absolutely no warranty. -
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X-Itools: Email/Web Log Search Engine
Strong Email & Apache Log Analysis with Active Security Features
... interest given to it by a world wide Organization (United Nations). Module renamed "X-Itools ELSE", for "X-Itools E-mail Log Search Engine". Some features: Log analysis and correlation of Postfix and Exchange servers, statistics, policy manager, in-deep analysis, automated network graphs for e-mail tracing, CSV export... The Swiss knife of Messaging Admins. In 2015, X-Itools ELSE is no more limited to E-mail logs: Apache logs are also processed and related stats and dashboards will be there! -
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Euler Pole Calculator (EPC)
A Matlab software to estimate Euler pole parameters
The EPC software calculates the expected velocities for any points located on the earth’s surface given the relevant Euler pole parameters and estimates the Euler pole parameters given the observed velocities of a set of sites located on the same tectonic plate.In version 2, the software is able to estimate or apply the origin rate bias (ORB) in the direct and inverse Euler pole problems. Keywords: Direct Euler pole problem, Inverse Euler pole problem, Origin rate bias. -
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Adherence terapeutic
Development of a scale that measures adherence in chronic patients
..., with an interclass correlation of 0.149. The scale is modified with nine items, obtaining a reliability of 0.750, and with an intraclass correlation of 0.835. There is a good correlation between the socioeconomic data and the characteristics of the dwelling. In regression models, these data (socioeconomic and housing) seem to have the highest incidence. The data, as in other studies, confirm the values of risk factors, emphasizing socioeconomic and housing data -
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xoshiro_test
test xoshiro r.n.g.
xoshiro -- XOR shift ROT -- random number gen. Fast. Attempt to parallelize ... not so easy. Use 'unsafe' code path leads to lowered cycle lengths. So not fully tested. Non-parallel is not as fast but full cycle length. Compare against PCG, which is also fast but has unfortunate hi-correlation. -
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Bloom Filter Analysis UCSB130A
Supporting Code for Bloom Filter Analysis UCSB CMPSC 130A F22
The full code set that corresponds to "Bloom Filters: A Look into its Design and an Analysis of its Performance", written by David Jr Sim. Instructions on how to use it are included in this project. This paper is in correlation with the University of California, Santa Barbara, Computer Science Undergraduate. -
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eprb_signal_correlations
Simulation of a two-channel Bell test, with closed-form proofs
Derivation, entirely by probability theory, of the correlation coefficient for a two-channel Bell test, with simulation in Ada and other languages. The Nobel Committe for Physics bans this program for subversive content. (Mirror of the repository at https://github.com/chemoelectric/eprb_signal_correlations) -
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CT4AM
Tools for 3D image analysis of additively manufactured parts
CT4AM is a cross-platform toolkit for 3D-image processing in the domain of additive manufacturing for toolpath visualisation or correlation to tomographic data and related materials science. It is written in C++ and provides small, problem-specific applications for viewing, analysing and visualising of volumetric data from micro-CT scans with respect to the complex process parameters and characteristics of additive manufacturing. Moreover, data analysis and processing of G-code are key assets... -
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nano_voltmeter
Nano voltmeter based on the Arduino Nano
A very simple nanovoltmeter with picovolt resolution. The high resolution is possible by using a chopper, auto correlation, a modified delta-sigma analog to digital converter, a 16 bit PWM with passive five pole RC filter configured in a self nulling loop. All signal processing after the chopper is done in the AC domain with the circuit configured as a nulling amplifier. AC amplifier gain is 10,000,000 and the amplifier is fed into the Arduino ADC. This gives resolution of 100 pV per bit... -
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metatea
METATEA enables fast 16S rRNA-based analyses at the sequence level
○ METATEA is developed to support 16S rRNA-based analyses at sequence level using both sequence-supervised and unsupervised modes for rapid and accurate comparison across samples and groups. ○ The sequence-supervised approaches using bacterial sequences from healthy persons and IBD patients were developed. However, you should use the same primers and sequencing platform for the sequence-supervised approaches. ○ Exclusive correlation value (ECV) was defined for the detection of mutually... -
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EduCDM
The Model Zoo of cognitive diagnosis models
... is a type of model that infers students' knowledge states from their learning behaviors (especially exercise response logs). Typically, the input of a CDM could be the students' response logs of items (i.e., exercises/questions), the Q-matrix that denotes the correlation between items and knowledge concepts (skills). The output is the diagnosed student knowledge states, such as students' abilities and students' proficiencies on each knowledge concepts. -
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Vision nmap's CPE to CVE conversor
Nmap's XML result parse and NVD's CPE correlation to search CVE.
Nmap's XML result parse and NVD's CPE correlation to search CVE. https://github.com/CoolerVoid/Vision2 -
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ensemble-verification-system
A software tool for verifying ensemble forecasts
The Ensemble Verification System (EVS) is designed to verify ensemble forecasts of hydrologic and hydrometeorological variables, such as temperature, precipitation, and streamflow, issued at discrete forecast locations (points or areas). -
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YeastpRofileSpearman
Software to calculate profiles around TSS and TTS of yeast mRNAs
YeastpRofileSpearman is a portable Windows form application, written in C#, to compute the profile of a genomic variable around transcription start (TSS) and termination (TTS) sites of yeast mRNAs. It is variation of the software application YeastpRofile (https://sourceforge.net/projects/yeastprofile/) in which Spearman’s rank correlation coefficient (Rs) is computed in place of Pearson correlation coefficient. The profile is obtained by calculating the genome-wide Rs between the genomic... -
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GenoCline
GenoCline is a free Java software for genetic cline analysis
Identification of clines from allele frequency or genome-wide databases. Angular transformation. Sigmoid function. Parameterization of a cline: orientation, Pearson’s product-moment correlation coefficient, linear and sigmoid regression and coefficient of determination. Graphical representation of the cline. Confidence limits. Spatial autocorrelation. Moran's index. Isolation by distance. Exponential regression. Correlation Fst/Distance. Centroid method. Cline's expected vs. predicted... -
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GENET-CNV
Integrated DNA copy number variation and gene expression analysis
The Boolean implication networks outperformed Bayesian networks, Pearson’s correlation networks, and other Boolean networks in constructing genome-scale co-expression networks evaluated with comprehensive biological pathways and Gene Ontology in MSigDB. References: Guo NL, Wan YW. Pathway-based identification of a smoking associated 6-gene signature predictive of lung cancer risk and survival. Artificial Intelligence in Medicine 2012 Jun;55(2):97-105. Ye Q, Singh S, Qian PR, Guo NL... -
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Statistics for MySQL
Add more statistical functions to MySQL.
"Statistics for MySQL" provides additional statistical functions (like Pearson's coefficient of correlation) which are missing in MySQL. DLLs for 32 and 64bit Windows as well as makefiles for Linux are available. -
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EMAP
A Cloud-Edge Framework for EEG Monitoring and Real-time Anomaly Pred.
... 2020 (DAC 2020). In case of usage please refer to: B. S. Prabakaran, A. G. Jiménez, G. M. Martínez, M. Shafique, “EMAP: A Cloud-Edge Hybrid Framework for EEG Monitoring and Cross-Correlation Based Real-time Anomaly Prediction”, IEEE/ACM 57th Design Automation Conference (DAC), July, 2020, (Accepted). -
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gsasnp2
PubMed ID: 29562348 / DOI: 10.1093/nar/gky175
* GSA-SNP2 is a successor of GSA-SNP (Nam et al. 2010, NAR web server issue). GSA-SNP2 accepts human GWAS summary data (rs numbers, p-values) or gene-wise p-values and outputs pathway genesets ‘enriched’ with genes associated with the given phenotype. It also provides both local and global protein interaction networks in the associated pathways. * Article: SYoon, HCTNguyen, YJYoo, JKim, BBaik, SKim, JKim, SKim, DNam, "Efficient pathway enrichment and network analysis of GWAS summary data... -
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PyTracking
Visual tracking library based on PyTorch
A general python framework for visual object tracking and video object segmentation, based on PyTorch. Official implementation of the RTS (ECCV 2022), ToMP (CVPR 2022), KeepTrack (ICCV 2021), LWL (ECCV 2020), KYS (ECCV 2020), PrDiMP (CVPR 2020), DiMP (ICCV 2019), and ATOM (CVPR 2019) trackers, including complete training code and trained models. -
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ViralPlaque
A fast, open-source and versatile ImageJ macro for the automated dete
Plaque assay has been used for a long time to determine infectious titers. We present ViralPlaque, a fast, open-source and versatile ImageJ macro for the automated determination of viral plaque dimensions from digital images. Also, a machine learning plugin is integrated in the analysis algorithm for adaptation of ViralPlaque to the user’s needs and experimental conditions. A high correlation between manual and automated measurements of plaque dimensions was demonstrated. This macro... -
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TI2BioP allows mainly the calculation of topological indices (spectral moments) derived from inferred and artificial 2D structures of DNA, RNA and proteins being possible to carry out a structure-function correlation irrespective of sequence alignments. TI2BioP version 3.0 is a python platform with a graphical interface designed for Windows, Linux and Mac OS.
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This is fork of SegDSee - SEG-D/B viewer, originally by Segrey Pavlukhin (https://mail.dmng.ru/freeware/?lang=en), modified by Pavel Gridin
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inspectIT
inspectIT is the leading Open Source APM
inspectIT is the leading open-source APM (application performance management) tool for monitoring and analyzing your Java(EE) software applications. Various sensors capture end-to-end information for every request from the end user, to the business tier all the way to the backends. inspectIT is based on an application-centric, business-focused approach, where each technical request is mapped to an application and to a business use case. With inspectIT you always know about the health of your...