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Identification of clines from allele frequency or genome-wide databases. Angular transformation. Sigmoid function.
Parameterization of a cline: orientation, Pearson’s product-moment correlation coefficient, linear and sigmoid regression and coefficient of determination. Graphical representation of the cline. Confidence limits.
Spatial autocorrelation. Moran's index.
Isolation by distance. Exponential regression. Correlation Fst/Distance.
Centroid method.
Cline's expected vs. predicted heterozygosity.
MDS. Sammon projection.
Geographical distances. Fst distances.
Export data to Arlequin, Phylip, Past and Poptree.
User-friendly input data.
Features
- Identification of clines from allele frequency or genome-wide databases. Angular transformation. Sigmoid function.
- Parameterization of a cline: orientation, Pearson’s product-moment correlation coefficient, linear and sigmoid regression and coefficient of determination.
- Graphical representation of the cline. Confidence limits.
- Spatial autocorrelation. Moran's index. Isolation by distance. Exponential regression. Correlation Fst/Distance. Centroid method. Cline's expected vs. predicted heterozygosity. MDS. Sammon projection. Geographical distances. Fst distances.
- Export data to Arlequin, Phylip, Past and Poptree.
- User-friendly input data.
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Categories
Ecosystem SciencesLicense
Creative Commons Attribution LicenseFollow GenoCline
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