Search Results for "genetic algorithm java" - Page 14
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Showing 902 open source projects for "genetic algorithm java"
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DeNovoCheck
DeNovoCheck: Inheritance analysis for NGS trio data
DeNovoCheck is intended to be used for inheritance analysis in NGS tio data. For rare dominant Mendelian diseases, patient-parent trios are often used to reduce the number of candidate variants. The algorithm bases the inheritance prediction on the data available in the parental BAM files and allows for a fast and reliable selection of potential de novo variants. -
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MapPSO is a tool for Ontology Alignment, which uses Discrete Particle Swarm Optimisation. A particle swarm is used to search for the optimal alignment. The algorithm is massively parallel and adapts naturally on parallel architectures.
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texgenpack
Texture compression and conversion program with KTX and DDS support.
texgenpack is a texture compression and conversion program featuring a command line utility and a simple GUI program . Compression is implemented using a genetic algorithm. It supports compression, decompression, conversion and comparison of texture and image files. The image format supported is PNG, while for textures there is support for KTX, PKM and DDS using ETC1, ETC2, DXT1/3/5 or BPTC (BC7) texture compression. Several uncompressed texture format are also supported. This program... -
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Game of Turmites
Conway's Game of Life and Turmites Combined!
This really isn't a game. It's all very randomly generated, and there is no way for any user input. I'll consider putting some in later. I had been wanting to make the Game of Life for some time as well as make some kind of genetic algorithm based code. So, here is what I came up with. While this may just seem like simplify a graphical display of what boredom looks like... well, it really doesn't go much past that point. If you Don't know what Conway's game of life is: It's the Black... -
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An important tool for Algorithm Visualization (AV) developers is a repository of good examples of existing AVs, including source code. The goal of this site is to build a collection of AV implementations from a variety of developers in the AV community.
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HIVCD
Informatics tool for contamination screening in the HIV sequencing lab
HIVCD is an informatics tool developed to identify patient sequences that are too similar to happen by chance alone. Highly similar sequences are likely to occur from contamination or other situations like geographic linkage. Full details can be found in our paper titled "Application of a new informatics tool for contamination screening in the HIV sequencing laboratory" The code provided is a simple user interface to the underlying algorithm. We provide it as a convenience but it comes... -
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Java Evolutionary Computation Library
As of 2012-12-18, this project may now be found at Google Code.
As of 2012-12-18, this project may now be found at http://http://code.google.com/p/paba JECO is a Evolutionary Computation Library deveoloped in Java. It includes a variety of evolutionary optimization techniques such as genetic algorithm, genetic programming, evolutionary mapping methods, particle swarm optimization, ant colonies, etc. -
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quadGT
Software package for the joint genotyping
quadGT is a software package for the joint genotyping of two parents, child’s normal genome and child’s tumor genome based on sequencing reads aligned to a reference genome. -
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EmployeesProfileViewer is my MSc final project. Consists of an application to represent the employees of an organization in a graphic map according to personal skills, using their evaluations on the different competences which the company needs. This software generates a graphical representation of the employees in a 2D map of coordinates, that pojects each worker as a figure in the map. The geometric characteristics of each one of these shapes will tell us how are the skills of the...
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ME_DSS
Microemulsion Decision Support System
This application allow user to predict microemulsion region based on algorithm consisted of artificial neural networks and random forests. Those techniques combined create Decision Support System. Application was created as a part of project K/DSC/000033 subsidy for young researchers from Polish Ministry of Higher Education. -
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Darwin 2: Java Framework for Evolutionary Computation (genetic algorithm, GA). A true framework with out-of-the-box functionality and extensibility of all classes. Interface-based pattern with dependency-injection to configure components.
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cerrla
The CERRLA algorithm, developed by Sam Sarjant
This project contains the files required to run the Cross-Entropy Relational Reinforcement Learning Agent (CERRLA) algorithm. Note that a copy of the JESS rules engine will also be required. -
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FJSP Software
A Software for Flexible Job Shop Scheduling
Flexible job shop scheduling problem (FJSP) is very important in many fields such as production management, resource allocation and combinatorial optimization. In the real manufacturing systems, each operation could be processed on more than one machine and each machine can also process several operations. This feature is known as flexibility. You can define your problem in this software and get an optimal solution as a Gantt Chart. This software is based on my M.Sc. thesis of Shahed... -
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This is a GUI, Java implementation of the Ant Colony Optimisation/Particle Swarm Optimisation (PSO/ACO2) rule induction algorithm. This project was inspired by Ant-Miner, but handles continuous attributes using PSO or now Differential Evolution.
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Most language just provided pop data structure and corresponding algorithm. JDS(java data structure) is intend to append some datastruct and algorithm, mainly, in java language and c++.
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Phantoms Chess Where Pawns Can become Queens Chess Game is zero-sum two-player. Team Members: Phantoms Team * Leader Gehad Sayed Kaseb Gehad.Kaseb@gmail.com * Co-leader Rawia Ahmed * Research team Hagar Samir Safaa Mohamed * Design and Implementation team Ahmed Helal Aya Eid Aya Tarek Eman Saleh Fatma El zhraa Ibrahim Hanan Mohamed John Samir Mina Victor Nahla Ibrahim Samira Magdy Samr Ayman * Integration Team Marwa Ayman Nahla Essam * Interface...
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Genetic Basis
A general genetic algorithm framework
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Exact Subgraph Matching Algorithm
Exact Subgraph Matching Algorithm for Dependency Graphs
... association detection and Protein-Protein interaction identification. This Java implementation implements our ESM algorithm. See README file: https://sourceforge.net/projects/esmalgorithm/files/ If you use our ESM implementation to support academic research, please cite the following paper: Haibin Liu, Vlado Keselj, and Christian Blouin. Exploring a Subgraph Matching Approach for Extracting Biological Events from Literature. Computational Intelligence, 2013. -
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This project provides a set of Python tools for creating various kinds of neural networks, which can also be powered by genetic algorithms using grammatical evolution. MLP, backpropagation, recurrent, sparse, and skip-layer networks are supported.
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Sentence Composer
Compose the writings semi-automatically
... algorithm" The prefix was "transductive learning" Learning algorithm. Transduction, or transductive inference, tries to predict new outputs on specific and fixed (test) cases from observed, specific (training) cases. The simplest realization for transductive inference is the method of k-nearest neighbors. Learning to learn learns its own inductive bias based on previous experience. ...AND SO ON.... Enjoy the program ! -
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MazeJen
java maze generator
MazeJen is a maze generator written in java which implements the Depth First Search algorithm, and can render mazes in both 2 and 3 dimensions. -
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Bouc-Wen-Baber-Noori model of hysteresis
Compute parameters of the Bouc-Wen-Baber-Noori model of hysteresis
... the documentation and the following papers: - Kalyanmoy Deb, Sameer Agrawal, Amrit Pratap, T Meyarivan. "A Fast and Elitist multi-objective Genetic Algorithm: NSGA-II". Journal IEEE Transactions on Evolutionary Computation (IEEE-TEC). 2002. Vol. 6. No. 2. pp. 182-197. - Gilberto A. Ortiz, Diego A. Alvarez, Daniel Bedoya-Ruiz. "Identification of Bouc-Wen type models using multi-objective optimization algorithms". Computers & Structures. Vol. 114-115. pp. 121-132. 2013. -
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String Distance with a Genetic Algorithm
Calculate String Distances with Genetic Algorithm
This measures the amount of universal time-units a classical Genetic Algorithm needs for one String to evolve into another, thus representing a perfect way to measure the String-metric distances. The smallest distance is -1 while the largest is infinite. This means that calculations with -1 to -0 universal-time units came from the past, and that such Strings already exist in this universe; thus representing a negative value. Furthermore, -1 universal time-unit is the maximum allowed time... -
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OhCrypt lets you easily encrypt and decrypt files using some of the most popular algorithms, like AES, Blowfish and Serpent. With OhCrypt, you can secure your data with a password-based encryption algorithm through a clean and simple interface. It demonstrates state of the art of cryptology techniques, such as password hashing and salt. Ohcrypt also features self-extractable and self-destructive encrypted files
