Search Results for "python data analysis" - Page 133
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Showing 6384 open source projects for "python data analysis"
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Advanced Numerical Instruments 2D
Advanced numerical instruments: adaptive meshing, FE methods, solvers
Ani2D provides portable libraries for each step in the numerical solution of systems of PDEs with variable tensorial coefficients: (1) unstructured adaptive mesh generation, (2) metric-based mesh adaptation, (3) finite element discretization and interpolation, (4) algebraic solvers. -
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UADetector
UADetector detects over 190 different desktop and mobile browsers.
Web sites and services often include code to detect browsers to adjust their behavior according to the user agent string received. UADetector is a library to detect over 190 different desktop and mobile browsers and 130 other User-Agents like feed readers and email clients. The analysis of UADetector is based upon the data from http://user-agent-string.info. -
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Data Spooler for SQLServer #SaveUkraine
Extracts table or query data from SQL Server 2005, 2008, 2012
#SaveUkraine #StopRussia #FreeUkraine #StopPutin #CrimeaIsUkraine #UnitedForUkraine #RussiaInvadedUkraine Spools/extracts/dump table or query data from SQL Server 2015, 2008,2012. Serial spool creates single dump file. Turbo mode offers 5x spool performance improvement. Sharded turbo more creates multiple files. -
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nail_systems_biology
NAIL is a toolset for network analysis in the life sciences
The NAIL (Network Analysis and Inference Library) project is a set of tools for solving problems in the life sciences using network (graph) approaches. NAIL includes methods for creating networks, analysing and comparing networks, and for visualising or presenting the results. These methods are designed as self-contained platform-independent components which can be called either from another program, or from a command line. Modelling biological systems as networks (graphs) is becoming... -
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SpeciesGeoCoder is an open-source software package written in Python and R, that utilise the GDAL library (http://www.gdal.org/) for fast analysis of geoTIFF files, which allows for the easy and fast coding of species into user-defined operational units. For more info: https://github.com/mtop/speciesgeocoder
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TextTools is a freeware corpus linguistics tool developed in Python to aid in research. This program analyzes user-created corpora and displays information about word (token) frequency, n-grams, clusters, collocations, keyword in context (KWIC), and keyness. TextTools is designed to be user-friendly and intuitive and will run natively on Mac OS X.
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iMS2Flux is a command line based high-throughput processing tool set for stable isotope labelled mass spectral data targeting metabolic flux analysis. To get started simply download and unzip the iMS2Flux.zip file and follow the getting started document for your OS. Current version 7.2.1 (last updated 9/30/2014) - Completes support and correction functionality for a new user specified generic data class. See the change log for full details.
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miRNA Temporal Analyzer (mirnaTA)
Differential expression analysis tool for miRNAs in temporal studies
The microRNA Temporal Analyzer (mirnaTA) is a bioinformatics tool which can be used to identify differentially expressed miRNAs in temporal studies. It is implemented in Perl and R package (>= 2.13.0) and can be run across multiple platforms such as Linux, Mac and Windows. The mirnaTA requires that users provide data from a minimum of two time points and analyze up to 20 time points. To normalize data and remove technical variability, Normal Quantile Transformation (NQT) was used... -
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GUDM
A tool for pre-processing and fusing heterogeneous datasets
Global Unified Data Modeler (GUDM) is a bioinformatics software tool used for pre-processing and integrating multiple heterogeneous datasets, collected from multi-modal sources, into an integrated dataset. This integrated dataset is supposed to be used for different types of medical analysis and unified decisions, using different machine learning approaches. -
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TeachingDemos
Bioinformatics related demos and tutorials using the R programming lan
Bioinformatics related demos and tutorials using the R programming language for large biological data. Licence: Creative Commons Attribution-NonCommercial 4.0 International License -
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SvnStat
Subversion (SVN) Statistics
SvnStat (Subversion Statistics) generates statistical reports with graphs and charts similar to StatCvs from Subversion (svn) logs. -
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picard
A set of tools for working with high-throughput sequencing data
A set of tools (in Java) for working with next generation sequencing data in the SAM/BAM format. Note that development has moved to GitHub at https://github.com/broadinstitute/picard and support is available on the GATK forum at http://gatkforums.broadinstitute.org/categories/ask-the-team -
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NanoCap
Carbon Fullerene and Capped Nanotube Generator
NanoCap is a generic application for the construction of low energy fullerene and capped nanotube structures. It provides an ideal tool to accompany the study of finite carbon molecules using computer simulation. The implementation involves a standalone application which includes a GUI and allows for dynamic visual inspection through 3D rendering. In addition, the NanoCap core libraries can be used in custom Python scripts that enabled the user to produce structures in bulk or to include... -
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ReArch Database Project
Code Repository for the Recursive Relational Archaeological DBMS
The Recursive Relational Archaeological Database (ReArch) is a data management platform that preserves the practical configuration that data tables provide, while relaxing the strict, attribute-based model that so characterized modern databases. The schema consists of an inherently recursive and extensible structure that can incorporate heterogeneous observations and analyses into a common framework in order to evaluate their commensurability. In this manner, ReArch provides a simple platform... -
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rseqflow
RNA-Seq analysis pipeline for QC, Expression, DifferentialExpression
RseqFlow is an RNA-Seq analysis pipeline which offers an express implementation of analysis steps for RNA sequencing datasets. It can perform pre and post mapping quality control (QC) for sequencing data, calculate expression levels for uniquely mapped reads, identify differentially expressed genes, and convert file formats for ease of visualization. A detailed description of the pipeline] is given here: https://sourceforge.net/p/rseqflow/wiki/PipelineDescription RseqFlow offers two run mode... -
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Source Navigator NG is a source code analysis tool. With it, you can edit your source code, display relationships between classes and functions and members, and display call trees. You can navigate your source code and easily get to declarations or implementations of functions, variables and macros (commonly called "symbols") which helps you discovering and mapping unknown source code for enhancement or maintenance tasks.
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Syntax2DNew
Syntax2D (latest ver. 1.3.7.0)
Syntax2D is a suite of tools for urban and architectural spatial analysis developed at the University of Michigan. It includes space syntax measures of isovists, axial maps, and visibility graphs, with some newer features such as path-based measures. New versions are released here. -
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UA-Parser
A multi-language port of Browserscope's user agent parser
ua-parser is a multi-language library for parsing User-Agent strings into structured data, such as browser, OS, and device information. Originally created for web analytics and user tracking, it supports a wide range of platforms and is available in JavaScript, Python, Java, and other languages. ua-parser is often used in server logs, analytics dashboards, and A/B testing systems to segment traffic. -
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AndroidRun
Basic position tracker application for running/biking...
Developped on Fairphone1 this App calculates distance, instant speed, average speed. It's suitable for Running/Biking. It also logs all these data (plus location information) in a CSV file that can easily be imported in libreoffice for example, for offline analysis. At this stage, application is a beta that need further testing on different device. Feedback is welcome. -
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Online Signature Verification
Real time signature verification using MATLAB and C#
Online Signature Verification technology requires primarily a digitizing tablet and a special pen connected to the USB port of a computer. An individual can sign on the digitizing tablet using the special pen regardless of his signature size and position. The signature is characterized as pen-strokes consisting x-y coordinates and pressure with the data being stored in a signature database. Dynamic time warping (DTW) and quadratic discriminant analysis (QDA) is used to get results where... -
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An optimized C library for numerically solving exterior ballistics problems. It supports standard drag models (Drag Functions G1-G8). The solution method is the common "3 degree of freedom" analysis found in many commercial programs.
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The CCP1GUI
An extensible GUI for computational chemistry codes
The CCP1GUI project aims to develop a free, extensible Graphical User Interface to various computational chemistry codes developed by the worldwide academic community, with an emphasis on ab initio Quantum Chemistry codes. -
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Protospacer
Rapid gRNA design and validation for CRISPR
... by gene ID, by exon/intron/UTR location, by sequence similarity, or by genomic co-ordinate. From here, users are able to evaluate potential off targeting, to export results in FASTA format or tabulated (e.g. for Microsoft Excel), and to connect to the Integrative Genomics Viewer (IGVref) and view target-sites in the context of genomic annotations, amino acid translations, and HT-Seq data (for off-target validation). We provide online video tutorials and a toy database from our main website. -
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The RatStim Data Parser takes in one or more CSV files (formatted in the predetermined rat ID/stimulus layout) and sorts them according to rat ID and stimulus value. The average values for each stimulus across all input files are output to a 'Master' Excel file, and the individual sorted entries are kept in an 'Intermediate' Excel file. This allows data to be examined at a higher level in the 'Master' file, while still allowing closr analysis of the organized data in the 'Intermediate...
