Search Results for "image analysis" - Page 13
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Showing 451 open source projects for "image analysis"
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PIVOT
PIVOT is a simple yet flexible visualization data tool
PIVOT is a simple yet flexible visualization tool based on Circos (Krzywinski et al., 2009), which offers a fast and aesthetical visualization of data and information. The Protein Interaction Visualization and Observation Tool (PIVOT) was developed specifically for the visualization of protein interaction. It is difficult to spot the proteins that have an interaction when given a large list of proteins but with PIVOT, it is easy to identify the them at a glance. PIVOT displays an image... -
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OpenTrack
Video and Image Analysis Extension for Firefox
OpenTrack is Firefox extension which is a combination video tracking and analysis tool for use in physics and biomechanics. It has three components: OpenTrack2d, a video and image analysis suite, the JSvg Analysis Console that gives access to graphing, math and statistical tools, and the Report Editor, a simple editor that can import OT graphics and video results for web presentation. -
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A DICOM-compliant 3D image display, analysis, and segmentation package for incorporating molecular imaging data in radiation oncology
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LogView++
Oil and Gas Software to Manage Well Log Data
Updated News: LogView++ Pro 2016 is now available for download. LogView++ is an Oil and Gas Software that might be useful for Engineers, Geologist, Petrophysicists and anybody who interested in managing well log data (las file). It is developed by using C++ programming language (MS Visual Studio Express / Community Edition) and wxWidgets Library using CodeBlocks GUI designer. http://www.firagiel.com -
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AgED
AgED - Analysis given Experimental Data
AgED performs automatic feature extraction from your image data and allows for their visualization and management. AgED relies on Elliptic Fourier Transcriptors to extract features from large quantities of image data. These features can then be visualized and you can evaluate them in a statistical manner. This type of analysis is particularly worthwile in the assessment of biological experiments. -
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GIIAF Microscopy Library
The GIIAF Microscopy Library, that uses customised OMERO software
This project incorporates a suite of tools that aim to allow researchers within Griffith's Imaging and Image Analysis Facility (GIIAF) to efficiently and effectively provide secure, centralised, web-accessible data storage, management and manipulation. The open-source Java-based OMERO software was customised to provide most of the features of this project. -
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colonyzer image analysis software
Image analysis estimating cell density in arrayed microbial cultures
Image analysis software for quantification of cell density in microbial cultures (e.g. S. cerevisiae) growing on solid agar plates. Specialises in detection of extremely low cell densities. Forms part of the Quantitative Fitness Analysis (QFA) workflow: http://research.ncl.ac.uk/qfa/ Suitable for high-throughput, genome-wide analysis of culture libraries when combined with the following qfa R package: http://qfa.r-forge.r-project.org/ This is the version presented, used and demonstrated in the following manuscripts: Lawless et al. 2010 http://dx.doi.org/10.1186/1471-2105-11-287 Addinall et al. 2011 http://dx.doi.org/10.1371/journal.pgen.1001362 Chang et al. 2011 http://dx.doi.org/10.1534/g3.111.000216 Banks et al. 2012 http://dx.doi.org/10.3791/4018 Development has been moved to github, where Colonyzer has undergone several recent improvements, particuarly making installation easier and analysis faster: https://github.com/CnrLwlss/Colonyzer -
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cancergrid-tma
A web-based application for the management of tissue microarray images
The Cancergrid Image Scorer is web-based application for the management and storage of tissue microarray (TMA) images and the associated metadata. The application enables the user to navigate a grid of TMA core images within a slide, zoom and pan around an image, and enter a score constrained to a specific scoring system. The submitted scores are scored in the eXist open source database, in an XML format, which is compatible with existing TMA standards, and thus allow the data to be archived and re-used in future analysis. -
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eSpoor
Determine a User's Internet Footprint
A Project undertaken as part of my MSc to determine a User's Internet Footprint. The project uses the fiwalk.py package to extract relevant artifacts from a disk image in the DFXML format, performs an analysis and saves the results in a form for human readers. -
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ImageToMySize
ImageToMySize converts to perferred image
The Image Converter to my size is provided in different methods including the interpolation one – created for high quality procedure – and the fast procedure method. File resizing converter features fast image resizing mode providing the opportunity to deal with images as soon as possible. The converter implies preview mode for the result analysis before its resizing.The most widespread formats: (BMP, JPEG, JPEG 2000, GIF, PNG) -
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Port Authority
Gains basic data about FreeBSD ports install for forensics analysis
Tools for finding programs installed on FreeBSD image using the ports system and cleanly outputting information like modify, access, and change times. Can also be used to find the UID of the user that most likely installed the program and attempts to use passwd file backups to put a login name to that user. -
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Analysis
Application to creating charts.
The goal of project is delivering useful and simple tools to creating charts. Functionality is provided by modules/plugins (OSGi technology). It allows you to create your plugins or customize Analysis application (by changing installed plugins in application). The Application, thanks to JAVA technology, is portable on the most operating system. In Files page you can find the application and also patches to its. -
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Download GPS track from the GPS logger "Solmeta Geotagger Pro" under Linux; Auslesen des Geotaggers * Geotag images with image direction, pitch, roll; Geotagging mit Blickrichtung * Altitudes/Höhen from geonames.org * NMEA analysis: DOP, satellite
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Analysis of Fundus Images of the Eye
Analysis of Fundus Images of the Eye
Analysis of Fundus Images of the Eye to diagnose problems like Glaucoma. Image enhancement, Viewing of Striations, and Color histogram analysis implemented. -
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ShiVaSmiles
A slick interface to see various scale analysis algorithms in action.
The Shape Visualizer is intented to be an exploratory/educational tool making it quick and easy to see how various mathematical methods perform in analysing and selecting the various patterns present on an image. The main website is built as a wiki gathering info and examples on the various implemented algorithms. The combination of the application and its wiki intend to constitute a nice little pedagogic toolkit for multiscale analysis. Feel free to contribute code or wiki content ! -
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PROJECT MOVED: see http://www.vmtk.org for up-to-date information. Libraries and tools for 3D reconstruction, geometric analysis, mesh generation and surface data analysis in image-based blood vessel modeling.
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Atlas2Cloud
Atlas2 Genome Analysis Pipeline on Amazon Web Services
This is the backend source code of the Atlas2-Cloud pipeline on Amazon which starts and terminates worker nodes, runs analysis and monitors worker instances. It is PRIMARILY meant to be used through Amazon Web Services (AWS) management console by looking for the public Atlas2-Cloud machine image. Alternatively, the code can also be used for running the pipeline from your computer. By installing this software on your computer you will be setting up your computer to act as the head node which would then run the pipeline from your computer. -
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Connected components toolbox
Extracts blobs using hue, saturation and value components
Luckly, there are a number of examples and source code written for connected components analysis. However, in most of these examples only the grayscale values are used and a single threshold is chosen for extracting blobs from an image. In this example, I used Hue, Saturation and Value components to perform blob extraction analysis(connected compoonent extraction). I also created a simple visual toolbox for demonstration purpose. -
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Pink is an image processing library developed at ESIEE Engineering for research and teaching purposes. It contains implementations of over 200 algorithms for image segmentation and filtering.
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SURF-nanodots
Very basic computer vision program
This was my first big programming project. I'd like to clean it up and improve the back end design when time permits. See the wiki for known issues and more information. A computer vision program for analysis of magnetic data collected by a scanning probe microscope. Originated in summer 2007 as a collection of C compiled for Matlab (MEX) files and was eventually ported to a standalone C++ application with a GUI created in Qt. This program takes atomic and magnetic force microscope (AFM/MFM) image pairs as input and uses threshold segmentation to identify magnetic nanodots by intensity in the AFM image. ... -
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BLIMToolbox
A set of tools for processing Argus images of the nearshore zone.
BLIM Toolbox is a collection of tools for the extraction and analysis of visual features in Argus images of the nearshore zone. The toolbox provides an implementation of the BarLine Intensity Mapper (BLIM) algorithm, which extracts high-intensity bands from Argus images. Also, several analysis and export functions are included in this toolbox, such as timestack plots and movies. The main incentive for the development of this toolbox was reducing the amount of time and effort a user spends on image analysis. ... -
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Free Organic Chemistry Analysis and Visualisation Tool; Chemical formula editor, calculation of threedimensional molecular structures, high-quality realtime rendering, ...
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This is a Matlab function that implements the Voronoi Local Density Analysis, which is a methodology based on Voronoi diagrams to analyze and search for local spatial density distribution relationships between gene expression image volumes.
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Crispy Plotter is a function graph plotter for mathematical functions, featuring high drawing speed and an intuitive interface that is fun to use.
