Search Results for "python data analysis" - Page 112
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Showing 6383 open source projects for "python data analysis"
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DirDiff
Python 2.7 script, analyzing 2 directories for differences.HTML output
Comparing two different versions of a directory with text files of any kind has never been easier. Detects deleted files, new files, files with changed name but same content and of course a side-by-side / line-by-line comparison of changed files. Number of context-lines is configurable. Here's, how to call it: >python DirDiff.py dir1 dir2 output.html or >python.exe DirDiff.py -l 3 -v olddir newdir dirdiff.html -l is the number of context lines in the side-by-side comparison. -v... -
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The LGTView interface aggregates the results from the LGTSeek pipelines with metadata. The pipeline results are shown in the table at the bottom with links to TwinBLAST while the metadata are summarized in the pie charts. The pie charts are interactive such that clicking on a slice of the pie will limit the data. LGTView is available in both VM (VDI found here) and Docker formats. Code used in LGTView can be found on GitHub at: https://github.com/jmatsumura/LGTHGT Additional...
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Mass-based dissimilarity
A data dependent dissimilarity measure based on mass estimation.
This software calculates the mass-based dissimilarity matrix for data mining algorithms relying on a distance measure. References: Overcoming Key Weaknesses of Distance-based Neighbourhood Methods using a Data Dependent Dissimilarity Measure. KDD 2016 http://dx.doi.org/10.1145/2939672.2939779 The source code, presentation slide and poster are attached under "Files". The presentation video in KDD 2016 is published on https://youtu.be/eotD_-SuEoo . Since this software is licensed... -
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CANStream
An applicaton for CAN bus coms development, testing and validation
CANStream is a .NET application intended to be used for CAN (Controller Area Network) bus communication development, testing and validation. CANStream allows to extensively test any system using CAN communication by sending and receiving CAN frames. Thanks to its powerful built-in mathematical expression evaluator, CANStream can also behave as a real control system feeding back the test device or commanding a third party device with context sensible data. Extended data logging and data analysis... -
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MerDAQ
A DAQ solution in Python 2 for your Ardruino
MerDAQ is a data acquisition GUI and other tools for collecting and storing time dependent. Originally designed to collect 4 temperature data vs. time and plot one of the temperatures in real time with matplotlib. Ideal for use with Arduino. -
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SeqPig
Use Apache Pig to process your large sequencing datasets!
SeqPig is a library for Apache Pig for the distributed analysis of large sequencing datasets. It provides import and export functions for file formats commonly used for sequencing data, as well as a collection of Pig user-defined-functions (UDF’s) to help process aligned and unaligned sequence data. Currently SeqPig supports BAM/SAM, FastQ and Qseq input and output. For more information see the manual at http://seqpig.sourceforge.net/ -
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Attitude Estimator
A C++ implementation of a nonlinear 3D IMU fusion algorithm.
Attitude Estimator is a generic platform-independent C++ library that implements an IMU sensor fusion algorithm. Up to 3-axis gyroscope, accelerometer and magnetometer data can be processed into a full 3D quaternion orientation estimate, with the use of a nonlinear Passive Complementary Filter. The library is targeted at robotic applications, but is by no means limited to this. Features of the estimator include gyro bias estimation, transient quick learning, multiple estimation algorithms... -
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PyVCI
Vibrational configuration interaction code for simulating IR spectra
The PyVCI program package is a general purpose open-source code for simulating accurate molecular spectra, based upon force field expansions of the potential energy surface in normal mode coordinates. It includes harmonic normal coordinate analysis and vibrational configuration interaction (VCI) algorithms, implemented primarily in Python for accessibility but with time-consuming routines written in C. Coriolis coupling terms may be optionally included in the vibrational Hamiltonian. Quartic... -
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E-Reader
Extreem Reader for Cosmological simulation data P-Gadet2 and ART codes
Extreem Reader for Cosmological simulation data P-Gadet2 and ART codes.It conserves memory by using memory mapped files. Contains some basic analysis tools such a KD-Tree, Minimum Spanning Tree, and rendering module using PMViewer algorithm. -
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TISCONSREP - консольное приложение, позволяющее сформировать отчет по трафику, используя базы данных ПО Traffic Inspector (Трафик Инспектор).
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YoMo
You Only Meter Once - The open hardware smart metering system
Researches have shown that immediate feedback can increase energy saving dramatically. YoMo aims to empower people using low-cost open hardware smart meters in their household. The metering system consists of a coordination unit, a raspberry pi, and several smart meters, arduino boards equipped with communication shields and our self-designed yomo metering shield. The smart meters are attached to household devices and monitor their energy consumption. The gathered data is timestamped... -
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VITAMINS
Visual and Insitu Analytics for Molecular Interactive Simulation
A framework to support the high performance analysis and visualisation of molecular dynamics trajectories directly acquired in-situ while the simulation is running, or read from files. Vitamins relies on the FlowVR software and comes with binding with Gromacs. Vitamins (Visual and In Situ Analytics for Molecular Interactive Simulation) is an open source framework for the analysis and visualisation of large molecular dynamics trajectories directly acquired in-situ while the simulation... -
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WIMSi
Bioinformatics Tools for the Anaysis of DNA Methylation Data
Genome-wide DNA methylation analyses find only modest correlations between differential methylation at gene promoters and expression. We created a new approach to methylation analysis based on shape-similarity that finds stronger associations between methylation and expression than previously observed. WIMSi includes both DISCOVERY and GENE LIST tools. The DISCOVERY tool is designed to discover patterns of methylation that correlate with differential expression, with minimal prior... -
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The beginnings of a word-processor coupled with a database. These programs are used by the translation industry to check the accuraccy of a translation by running the associated word pairs through a machine translation program. Will now open the same files it closes with.
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GNU Solfege is *free* ear training software written in Python 3.4 using the Gtk+ 3 toolkit. The program is designed to be easily extended with lesson files (data files), so the user can create new exercises.
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scFvMiner
Scripts for analysing NGS data
These scripts written in java can be used for deep sequencing analysis of the scFv antibodies from a synthetic antibody library and yields complete sequence information on the randomized areas of antibodies enriched from the library by phage display. The methods are descriped in Lövgen, J., Pursiheimo, J.P., Pyykkö, M., Salmi, J. & Lamminmäki, U. (2016) Next generation sequencing of all variable loops of synthetic single framework scFv – application in anti-HDL antibody selections. New... -
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SHORE is a Next Generation Sequencing data analysis suite. Please find the manual at http://shore.sourceforge.net/wiki
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A tool for extracting and preprocessing spectral count data for label-free quantitative proteomic analysis. This program is designed to be used with the Trans-Proteomic Pipeline (TPP).
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XParallax viu
Software for automated astrometry
XParallax viu is a free software tool for automated astrometric data reduction of astronomic CCD images. It helps astronomers to perform an accurate astrometric reduction of dozens ore even hundreds of images which can be used in subsequent data analysis process. Fit headers generated by this software are fully compatible with other commonly used image utilities like SAO DS9 or Aladin Sky Atlas. -
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TraceInspector
Offline Wily Transaction Inspector 0.16.7.3 BETA
Offline Wily Transaction Inspector is a Java standalone application with which one can analyze trace files offline generated by Wily Introscope Workstation or Webview. -
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Oracle-to-S3 data uploader
Ad-hoc data uploader for Oracle and Amazon-S3
Let's you stream your Oracle table/query data to Amazon-S3 from Windows CLI (command line). Features: Streams Oracle table data to Amazon-S3. No need to create CSV extracts before upload to S3. Data stream is compressed while upload to S3. No need for Amazon AWS CLI. Works from your OS Windows desktop (command line). It's executable (Oracle_To_S3_Uploader.exe) - no need for Python install. It's 64 bit - it will work on any vanilla DOS for 64-bit Windows. AWS Access Keys... -
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newsscrape
news headline collecting for analysis in determining the category
newsscrape is web scraping for news headline to analyse on how it relates to a news category. - It extracts RSS feed from Google News. - Each news headline is matched against Google News category like Entertainment, Sports, etc. - Called from scheduler to collect this data at 5 minutes interval and be accumulated in a database. - It contains R statistical computing scripts to learn the pattern on words in the headline resulting a particular category. - To test its accuracy in predicting... -
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Combenefit
Synergy analyses of drug and other other agent combinations
Combenefit software is a standalone application for Windows that performs surface analyses of drug and other agent combinations to identify synergy. Please cite as: "Di Veroli,G.Y. et al. (2016) Combenefit: an interactive platform for the analysis and visualization of drug combinations. Bioinformatics." (http://bioinformatics.oxfordjournals.org/content/early/2016/05/27/bioinformatics.btw230.abstract) Current version (2.021): https://sourceforge.net/projects/combenefit/files/Combenefit... -
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VisTrails is a new scientific workflow management system developed at the University of Utah that provides support for data exploration and visualization. Written in python, it has a visual programming interface for many libraries, including VTK.
