Showing 254 open source projects for "genes"

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  • 1

    ogg

    OGG: Ontology of Genes and Genomes

    The OGG (Ontology of Genes and Genomes) is a biological ontology that represents genes and genomes of various biological organisms. Please cite the OGG paper: He Y, Liu Y, Zhao B. OGG: a biological ontology for representing genes and genomes in specific organisms. Proceedings of the 5th International Conference on Biomedical Ontologies (ICBO), Houston, Texas, USA. October 8-9, 2014. Pages 13-20. http://ceur-ws.org/Vol-1327/icbo2014_paper_23.pdf or: https://ogg.googlecode.com/svn/trunk...
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  • 2
    BIRBU (BIological Relationship BUilder) is a Java tool for microarray gene expression data analysis. BIRBU identifies biologically significant relationship between genes using microarray data and prior knowledge on relationships between genes.
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  • 3
    A biological data warehouse that locally stores and integrates biological sequences, molecular interactions, homology information, functional annotations of genes, and biological ontologies. Website: http://bioinformatics.ubc.ca/atlas
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  • 4

    gene2path

    A tool to study fish gene pathways by search of orthologous genes

    Most of the gene regulation pathways data from experiments are drawn from humans or from species commonly used as experimental animal models. Accordingly, the software packages to analyse these data on the basis of specific gene identification codes (IDs) or accession numbers (AN) are not easy to apply to other organisms that are less characterized at the genomic level. Here, we have developed the Gene2Path programme which automatically searches pathway databases to analyse microarray...
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