Search Results for "genes"

...Its purpose is to turn isolated prompt adjustments into reusable, auditable evolution assets, giving agent teams a more structured way to improve behavior over time. The project uses a protocol-constrained approach centered on concepts such as genes, capsules, and events, which are stored as structured assets and selected through signal matching logic. It also depends on Git as part of its operating model, using repository state for rollback, blast-radius calculation, and solidification workflows, which makes it especially relevant for code-centric agent environments. The CLI integrates with external agent runtimes through setup hooks, including support for platforms such as Cursor, where hooks can fire at specific lifecycle moments like session start or after file edits.

...For the most up-to-date description, please visit http://quast.sf.net. Below are just some highlights. QUAST computes several well-known metrics, including contig accuracy, the number of genes discovered, N50, and others, as well as introducing new ones, like NA50 (see details in the paper and manual). A comprehensive analysis results in summary tables (in plain text, tab-separated, and LaTeX formats) and colorful plots. The tool also produces web-based reports condensing all information in one easy-to-navigate file. ...

* GSA-SNP2 is a successor of GSA-SNP (Nam et al. 2010, NAR web server issue). GSA-SNP2 accepts human GWAS summary data (rs numbers, p-values) or gene-wise p-values and outputs pathway genesets ‘enriched’ with genes associated with the given phenotype. It also provides both local and global protein interaction networks in the associated pathways. * Article: SYoon, HCTNguyen, YJYoo, JKim, BBaik, SKim, JKim, SKim, DNam, "Efficient pathway enrichment and network analysis of GWAS summary data using GSA-SNP2", Nucleic Acids Research, Vol. 46(10), e60(2018)...