User Activity

  • Posted a comment on ticket #117 on Protein Ontology (PRO)

    Here is a look at the first few data is as follows: MGI column data|name&PMID|PR assigned by PRO|PRO assessment|HIERARCHY term level The last three columns are my edits PR:Q9ERP2; Agrn; dynamic PMID:64996 incorrect PMID, should be union of isoform 1 and isoform 2 PR:M0QWP1 Agrn dynamic PMID:11018052 PR:M0QWP1 done organism-sequence UniProtKB:A0A0R4J0I9 Lrp1 dynamic PR:Q91ZX7 PMID missing, sequence is identical to SP entry. organism-gene UniProtKB:A8R0T9 Esp6 PR version dynamic PMID:17935991 WRONG...

  • Posted a comment on ticket #117 on Protein Ontology (PRO)

    The first example (PR:Q9ERP2) in the file need review by MGI. Q9ERP2 corresponds to the N terminus of the Short isoform, it has a distinct N terminal fragment, and could correspond to isoform 1 or 2 (see Figure 1 attached). Also the PMID:64996 provided is incorrect If the intent is to annotate the short isoform, a union term should be created. encompassing isoform 1 and 2 For the other isoform the long, this is the term [Term] id: PR:M0QWP1 name: agrin isoform m4 (mouse) def: "An agrin (mouse) that...

  • Posted a comment on ticket #117 on Protein Ontology (PRO)

    Ok Will look at this tomorrow Ceci ----- Original Message ----- From: Darren Natale darren_natale@users.sf.net To: [pro-obo:term-requests] 117@term-requests.pro-obo.p.re.sf.net Sent: Thu, 01 Jun 2017 17:48:20 -0400 (EDT) Subject: [pro-obo:term-requests] #117 PR:Trembl records to allow in files Looking at a few of these, I note that they cannot be made automatically, and cannot be simply imported from the dynamic term maker. [term-requests:#117] PR:Trembl records to allow in files Status: accepted...

  • Posted a comment on ticket #91 on Protein Ontology (PRO)

    Dear Val, We have a way to express now the GDP bound form of Spi1 here is the stanza...

  • Posted a comment on ticket #96 on Protein Ontology (PRO)

    OK No problem Ceci From: "Sebastian Köhler" [mailto:koehlers@users.sf.net] Sent:...

  • Posted a comment on ticket #96 on Protein Ontology (PRO)

    Dear Sebastian, I have an additional question for you. But first want to give you...

  • Posted a comment on ticket #96 on Protein Ontology (PRO)

    Dear Sebastian, I was assigned to review your term request. I need further clarification...

  • Posted a comment on ticket #96 on Protein Ontology (PRO)

    Dear Sebastian, I was assigned to review your term request. I need further clarification...

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arighi
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2008-04-29 17:34:18

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