VDJFasta Reviews

change the combination calculation funtion, i.e. nCk, to sub combination { my( $n, $k ) = @_; return unless defined $n && $n =~ /^\d+$/ && defined $k && $k =~ /^\d+$/; my $product = 1; while( $k > 0 ) { $product *= $n--; $product /= $k--; } return $product; } as in Math/Counting.pm get 30% of speedup!

The software is great, but be aware there is a mistake in the README file. It tells you to point to the program 'blastall' when setting $self->{blast} = "/location/of/blastall" but actually you need to point to 'blastn' not 'blastall'. The the program works fine. Good job!

Vdjfasta is great! Thanks.

This core module enables a variety of sophisticated antibody analysis.