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Sequence Ontology

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browse code, statistics, last commit on 2009-12-22 cvs -d:pserver:anonymous@song.cvs.sourceforge.net:/cvsroot/song login

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  • Comment: Processed_Transcript

    Hi Howard, Its there. Checked in. If you have any more requests, get them in before the 23rd, or they will sit around until January. Thanks Karen.

    2009-12-22 00:47:53 UTC by eilbeck

  • Sequence Ontology

    eilbeck committed patchset 353 of module ontology to the Sequence Ontology CVS repository, changing 5 files.

    2009-12-22 00:45:12 UTC by eilbeck

  • Processed_Transcript

    Hi Karen, I would like to suggest the term: Processed_Transcript Definition: an RNA transcript of a genomic locus for which no open reading frame has been identified and for which no other function has been determined. Parent: transcript (SO:0000673) We have been calling these "transcripts of unknown function" but both Vega and Ensembl use "processed transcript" in this context and...

    2009-12-17 20:46:47 UTC by hdene

  • Sequence Ontology

    eilbeck committed patchset 352 of module ontology to the Sequence Ontology CVS repository, changing 4 files.

    2009-12-11 18:51:14 UTC by eilbeck

  • Comment: tandem_duplication as a sequence_feature

    done - at last :o)

    2009-12-11 18:50:06 UTC by eilbeck

  • Sequence Ontology

    eilbeck committed patchset 351 of module ontology to the Sequence Ontology CVS repository, changing 4 files.

    2009-12-11 18:29:38 UTC by eilbeck

  • Comment: Conserved_region vs High_identity_region

    Hi I have added this as a sibling of conserved region. If this is not what you wanted, please contact me, since I don't have your contact details. It is a child of experimental feature. the new term ID is SO:0001502 and I will check it into cvs today I am closing the track. --Karen.

    2009-12-11 18:13:02 UTC by eilbeck

  • Comment: peptide_collection

    Hi Nicole, This is added. I will check it in later. The ID is SO:0001501 --Karen.

    2009-12-11 18:01:51 UTC by eilbeck

  • Comment: NTR: rDNA

    Hi Jane, Does this work for you? rRNA primary transcript --K.

    2009-12-08 23:43:44 UTC by eilbeck

  • peptide_collection

    Definition: A collection of peptide sequences Synonyms: polypeptide collection, peptide set Parent: sequence_collection (SO:0001260)

    2009-12-08 17:08:59 UTC by nlw

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