JAligner is an open source Java implementation of the dynamic programming algorithm Smith-Waterman with Gotoh's improvement for biological local pairwise sequence alignment with the affine gap penalty model.
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5000 downloads of JAligner
Total number of downloads of JAligner releases has reached 5000 (~3 GB of bandwidth, thanks SF.Net)! [All time Statistics: http://sourceforge.net/project/stats/index.php?group_id=88312&ugn=jaligner&type=&mode=alltime]
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