PF_HP Icon

PF_HP

Prediction of proteinfolding in 2D HP model

Add a Review
1 Download (This Week)
Last Update:
Download einleitung.txt
Browse All Files
BSD Linux

Screenshots

Description

Even in the simplified two dimensional HP-model (hydrophob/polar) the prediction of proteinfolding is NP complete. We implement a brute force algorithm with serial and parallel execution to solve short inputs of HP sequences (0-1 bitstrings).

Selbst im vereinfachten zweidimensionalen HP-Modell (hydrophob/polar) ist die Proteinfaltung bereits NP-vollständig. Hier implementieren wir einen brute-force Algorithmus zur Lösung kurzer Eingabesequenzen (0-1-Bitstrings) für die Proteinfaltung.

Spende einen Cappuccino:
Bitcoin: 1D6s1ScEQmchGiSBNFN4haxzwfjhg7MCVM

Litecoin: Lbo2jxD85ymyq5167r7yFVZkEr73F2h44B

PF_HP Web Site

Features

  • please use serial version, because it outperforms current parallel version!

KEEP ME UPDATED

Write a Review

User Reviews

Be the first to post a review of PF_HP!

Additional Project Details

Languages

German

Intended Audience

Education, Healthcare Industry, Science/Research

User Interface

Console/Terminal

Programming Language

Eiffel

Registered

2014-02-14
Screenshots can attract more users to your project.
Features can attract more users to your project.