JAligner is an open source Java implementation of the dynamic programming algorithm Smith-Waterman with Gotoh's improvement for biological local pairwise sequence alignment with the affine gap penalty model.

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Categories

Bio-Informatics

License

BSD License, GNU General Public License version 2.0 (GPLv2)

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Additional Project Details

Languages

English

Intended Audience

Science/Research, Developers

Programming Language

C#, Java

Related Categories

C# Bio-Informatics Software, Java Bio-Informatics Software

Registered

2003-08-20
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