CUSHAW: CUDA-based Short Read Alignment Files

the first aligner introducing a complete paired-end alignment on GPUs

Status: Beta

Brought to you by: nkcslyc

The interactive file manager requires Javascript. Please enable it or use sftp or scp.
You may still browse the files here.

Name	Modified	Size	InfoDownloads / Week
Parent folder
sim120_error_rate_0.01	2012-01-17		0
sim72_error_rate_0.01	2012-01-17		0
sim36_error_rate_0.01	2012-01-17		0
sim120_error_rate_0.04	2011-09-28		0
sim72_error_rate_0.04	2011-09-28		0
sim36_error_rate_0.04	2011-09-28		0
err000589.part4.rar	2011-07-28	9.0 MB	0
err000589.part3.rar	2011-07-28	41.9 MB	0
err000589.part2.rar	2011-07-28	41.9 MB	0
err000589.part1.rar	2011-07-28	41.9 MB	0
Totals: 10 Items		134.9 MB	0

Other Useful Business Software

Get Avast Free Antivirus with 24/7 AI-powered online scam detection

Get protection for today’s online threats. Free.

Award-winning antivirus protection, as well as protection against online scams, dangerous Wi-Fi connections, hacked accounts, and ransomware. It includes Avast Assistant, your built-in AI partner, which gives you help with suspicious online messages, offers, and more.

Learn More

Our Free Plans just got better! | Auth0

With up to 25k MAUs and unlimited Okta connections, our Free Plan lets you focus on what you do best—building great apps.

You asked, we delivered! Auth0 is excited to expand our Free and Paid plans to include more options so you can focus on building, deploying, and scaling applications without having to worry about your security. Auth0 now, thank yourself later.

Try free now

Recommended Projects

CUSHAW2: Parallel Gapped Read Alignment
One of the leading short-/long-read aligner to large genomes
MUMmerGPU
MUMmerGPU is a high-throughput DNA sequence alignment program that runs on nVidia G80-class GPUs. It aligns sequences in parallel on the video card to accelerate the widely used serial CPU program MUMmer.
BarraCUDA Fast Short Read Aligner
Barracuda is a high-speed sequence aligner based on Sanger's BWA and utilizes the latest Nvidia CUDA architecture for accelerating alignments of sequence reads generated by next-generation sequencers.
Cookiecutter Data Science
Project structure for doing and sharing data science work

CUSHAW: CUDA-based Short Read Alignment Files

the first aligner introducing a complete paired-end alignment on GPUs

Get an email when there's a new version of CUSHAW: CUDA-based Short Read Alignment