CrossMap is a program for convenient conversion of genome coordinates and genomeannotation files between assemblies (eg. lift from GRCh36/hg18 to GRCh37/hg19 or vice versa).It support file in BAM, SAM, BED, Wiggle, BigWig, GFF, GTF format.

Features

  • Genome coordinates conversion between assembiles
  • Support BAM, SAM, BigWig, Wiggle, BED, VCF input format
  • Run on Linux, Mac OS

Project Samples

crossmap Screenshot 1

Project Activity

See All Activity >

Categories

Bio-Informatics

License

GNU General Public License version 2.0 (GPLv2)

Follow crossmap

crossmap Web Site

You Might Also Like
Finance Automation that puts you in charge Icon
Finance Automation that puts you in charge

Tipalti delivers smart payables that elevate modern business.

Our robust pre-built connectors and our no-code, drag-and-drop interface makes it easy and fast to automatically sync vendors, invoices, and invoice payment data between Tipalti and your ERP or accounting software.
Learn More
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of crossmap!

Additional Project Details

Operating Systems

Linux, BSD, Mac

Intended Audience

Science/Research, Education, Engineering

Programming Language

Python, C

Related Categories

Python Bio-Informatics Software, C Bio-Informatics Software

Registered

2013-10-09
Report inappropriate content