Wienert S, Heim D, Kotani M, Lindequist B, Stenzinger A, Ishii M, Hufnagl P, Beil M, Dietel M, Denkert C, Klauschen F. CognitionMaster: an object-based image analysis framework. Diagn Pathol 2013, 8:34

Features

  • Object-based image analysis
  • C# component library
  • Plugin Interface
  • Open DICOM files (free plugin using ClearCanvas)
  • Open jp2, scn, svs, ndpi and mrxs files (commercial plugin using Virtual Slide Access - SDK 4.0)
  • C# script editor / compiler
  • Image processing chain editor
  • Object model editor
  • 2D scatterplot
  • VarInterop
  • ObjectLayer data structure for high-level formulations of algorithms
  • Batch processing
  • "Generic Business Client" application development tool

Project Samples

User defined cell interaction analysis of a fluorescent bone image with in-program scripting. Image of Ki67 stained breast cancer tissue. Excerpt of the class diagram.

Project Activity

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Categories

Algorithms, Frameworks, Bio-Informatics, Image Processing, Image Processing Libraries

License

GNU General Public License version 3.0 (GPLv3)

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Additional Project Details

Operating Systems

Windows

Languages

English, German

Intended Audience

Healthcare Industry, Science/Research, Developers

User Interface

Win32 (MS Windows), Plugins

Programming Language

C#

Related Categories

C# Algorithms, C# Frameworks, C# Bio-Informatics Software, C# Image Processing Software, C# Image Processing Libraries

Registered

2011-12-18
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