A Perl object layer for representing BSML(Bioinformatic Sequence Markup Language) documents. The object layer can read/write BSML documents adhering to the BSML DTD v3.1.
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-BSML::FeatureRelationshipLookup: Adding module to track Feature relationships in BSML files -BSML::Merger: initial checkin -BsmlSequence: added support for BSML::Merger (added methods addBsmlFeatureTables and addBsmlFeatureGroups ) -BsmlBuilder: added new methods to support BSML::Merger -BsmlDoc: added new methods to support BSML::Merger -Indexer: Removed no-no idiom of Indexer/Fasta.pm use per task 2106 -BsmlParserSerialSearch: Corrected sequenceHandler method - now supports Interval-loc startopen & endopen attributes.
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