From: Albert <mai...@gm...> - 2015-11-23 14:46:36
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Hello: I just found a a very nice module of pymol, called "Molecular Sculpting". However, according to the description in Pymolwiki, it works like a real-time energy minimizer, except that it isn't minimizing the energy. Instead, its just trying to return local atomic geometries (bonds, angles, chirality, planarity) to the configuration the molecules possess when they were first loaded into PyMOL. So I am just wondering does the developer have any planning to improve this nice too? For instance introducing forcefiled for this tool (eg: Amber FF for protein, GAFF for the ligand). There is a "optimize" plugin in Pymol, maybe the developer can consider merge them together? Thank you very much Albert |