Re: [PyMOL] pymol crashes on xyz files with about 6000 atoms (slightly more).

[Yotam A. <yo...@gm...>]

Hi Thomas.

Thanks for the quick replay. I installed the svn version of pymol with the
same result. I know that 6000 atoms isn't much for this task and this
baffle me. Is there a way for me to de-bug this? Perhaps my input file is
faulty.


On Tue, Oct 22, 2013 at 1:32 AM, Thomas Holder <
sp...@us...> wrote:

> Hi Yotam,
>
> 6000 atoms should be absolutely no problem, even with much less memory.
> There were few known memory leaks that have been fixed since 1.4, so could
> you try to compile the latest code from SVN?
>
> http://pymolwiki.org/index.php/Linux_Install
>
> Cheers,
>   Thomas
>
> On Oct 21, 2013, at 4:58 PM, Yotam Avital <yo...@gm...> wrote:
> > Hi.
> >
> > I have python (1.4) on a xubuntu 12.04 machine (fresh install). The
> machine has 6GB ram and an intel i3 processor (I don't remember the exact
> model). On a previous install of Ubuntu (13.04) I had no trouble viewing
> files of that size, but now I can't. I get the "standard" EEK! pymol just
> run out of memory etc.
> >
> > To my knowledge, 6GB of ram should be sufficient for such task, isn't
> that so?
> >
> > How can I view these files?
>



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