From: Rye T. <rye...@ry...> - 2012-12-03 22:03:35
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I have a silicon bulk system. Pymol indicates that a handful of the atoms are bonded to each other. Many bonds are not indicated. Is there some value I can adjust that will make pymol indicate that more atoms are bonded? I usually do this by setting some cutoff radius, but googling around has yielded no results. I see that there is a way to bond atom pairs manually, but that would be incredibly tedious given the number of bonds there should be. Thanks for any help! Rye |