From: Per L. <per...@sb...> - 2012-10-26 15:38:54
|
Thanks, it works beautifully Cheers /Per 26 okt 2012 kl. 16:42 skrev Jason Vertrees: > Hi Per, > >> So, to add to that, the version that is available through eg MacPorts (v 1.5 iirc) should give me what I want? >> I watched a Youtube-video showing some of the rendering capabilities in the Volume-interface, and it seems to be really nice. > > Volume rendering came out in v1.4 of PyMOL. So, you should be set. > > The use of volume rendering for visualizing electron density, cryo-EM, > and electrostatics has yet to hit its maturity. It's more flexible and > beautiful than iso-contours -- and in fact can degenerate into > iso-contours if you want. So you get your old representations > (isomesh/isosurface) but you also get to visualize one or more ranges > of data colored exactly as you want. And, coming soon, we'll be able > to assign different density values to different scenes so that you can > animate the transitions in movies. We are also planning on improving > the PyMOL UI to make volumes easier to use. > > Cheers, > > -- Jason > > >> 26 okt 2012 kl. 06:15 skrev Jason Vertrees: >> >>> Hi Per, >>> >>>> I am wondering whether the open-source build of pymol for OS X (10.7) comes >>>> with the same volume-visualization capabilities as the incentive version >>>> (1.5). Essentially I'm interested in being able to do the same thing as is >>>> described here: http://pymol.org/volume_details >>>> >>>> Also, are there any differences between incentive v 1.4 and 1.5 in terms of >>>> volume visualization? >>> >>> There is no difference in volume rendering between the open-source >>> PyMOL and the Incentive. The only difference remotely related is that >>> Incentive PyMOL can automatically synthesize maps from MTZ files. >>> >>> Cheers, >>> >>> -- Jason >>> >>> -- >>> Jason Vertrees, PhD >>> PyMOL Product Manager >>> Schrödinger, Inc. >>> >>> (e) Jas...@sc... >>> (o) +1 (603) 374-7120 >> > > > > -- > Jason Vertrees, PhD > PyMOL Product Manager > Schrödinger, Inc. > > (e) Jas...@sc... > (o) +1 (603) 374-7120 |