Re: [PyMOL] Axes.py question

[Gudrun L. <gud...@gm...>]

Thank you very much! Really cool!
Gudrun

Am 28.03.2012 um 17:38 schrieb Jason Vertrees:

> Hi Gudrun,
> 
> The quickest way would be to center the camera on your selection/protein:
> 
> # create the axes
> 
> run axes.py
> 
> # put camera center at center of protein geometry
> 
> orient 6lys
> 
> x = cmd.get_position()
> 
> # move the axes
> 
> cmd.set_object_ttt("axes", [1, 0, 0, x[0], 0, 1, 0, x[1], 0, 0, 1,
> x[2], 0, 0, 0, 1])
> 
> Cheers,
> 
> -- Jason
> 
> On Wed, Mar 28, 2012 at 9:00 AM, Gudrun Lotze <gud...@gm...> wrote:
>> Dear all,
>> 
>> I used the second script from page http://www.pymolwiki.org/index.php/Axes to draw those axes.
>> 
>> However they are not plotted within my 6Lys.pdb file, those axes are located next to the crystal structure. I honestly don't know whee is the center of 6Lys.pdb, but is there a chance to bring 6Lys.pdb and axes.py with regard to their centers into one point, please? Basically, the axes.py sits in the center of the molecule.
>> Is there a defined way to achieve this without random try & fail translations, please?
>> 
>> Thank you for your help.
>> Kind regards
>> Gudrun
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> 
> 
> 
> -- 
> Jason Vertrees, PhD
> PyMOL Product Manager
> Schrödinger, LLC
> 
> (e) Jas...@sc...
> (o) +1 (603) 374-7120