Re: [PyMOL] combine opening pymol --> never mind

[David S. <da...@sc...>]

I regret I didn't follow the normal mode of operations...

Search the web, pymol wiki, .pymolrc

On Thu, 4 Sep 2008, David Shin wrote:

> Hi -
>
> Basically I have a bunch of .pdb's with the same name, but with different
> coordinates, that all reside in different directories.
>
> I want to put a script in my personal bin directory such that I can run
> pymol and open that set of .pdb's, but then also run a pymol script to set
> up the session.
>
> ie. combine something like this:
>
> #!/bin/sh
> pymol mol1.pdb mol2.pdb mol3.pdb
>
>
> with something like this:
> cmd.hide("everything","all")
> cmd.show("ribbon"    ,"all")
> cmd.spectrum("count",selection="all",byres=1)
> cmd.set('''seq_view''','''1''',quiet=0)
>
>
> Thanks,
> Dave
>
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