Re: [PyMOL] Single transparent sphere

[DeLano S. <de...@de...>]

Pre 1.0:
 
fragment methane, mysph
remove hydro and mysph
alter mysph, vdw=2.0
as spheres, mysph
set sphere_transparency, 0.5, mysph
 
Post 1.0:
 
pseudoatom mysph, vdw=2.0
as spheres, mysph
set sphere_transparency, 0.5, mysph
 
Cheers,
Warren
 



  _____  

From: pym...@li...
[mailto:pym...@li...] On Behalf Of jjv5
Sent: Friday, April 06, 2007 4:55 AM
To: PyM...@li...
Subject: [PyMOL] Single transparent sphere



Hi,

Does anyone know of a good way to create a single transparent sphere of
varying size? We've tried using a single atom and changing the vdw, but we
are unable to produce a surface of a single atom. CGO objects work but
cannot be made transparent. What we'd really like is a transparent CGO
sphere. Any ideas? 

Thanks,
Jim