Re: [proteowizard-support] idconvert.exe "cannot handle CV term in SpecificityRules"

[Jesse M. <jg...@uc...>]

Hi Matt,

Proteowizard release: 3.0.6909
Proteowizard IdentData: 3.0.6909
Build date: Nov 20th 2014

Thank you,
Jesse

On 12/23/2014 2:59 PM, Chambers, Matthew wrote:
> Hi Jesse,
>
> I suspect you're not actually running that version of ProteoWizard, 
> but some older version. That version should definitely support that 
> term when writing pepXML.
>
> Can you verify what version you see when you run that idconvert exe 
> without arguments?
>
> Thanks,
> -Matt
>
>
> On 12/23/2014 4:35 PM, Jesse Meyer wrote:
>> Hi all,
>>
>> I just started getting an error with idconvert after installing the
>> newest TPP v4.8 and the newest proteowizard v3.0.6965.  When I run ID
>> convert to make pep.xml from .mzid I get this error:
>>
>> [write_search_summary] Cannot handle CV term in SpecificityRules:
>> modification specificity protein N-term.
>>
>> I looked at the latest CV specification and this term seems acceptable
>> and not obsolete.
>>
>> Any help would be appreciated.
>>
>> Thank you,
>> Jesse
>>
>


-- 
Jesse G. Meyer
Ph. D. Candidate
Department of Chemistry and Biochemistry
University of California, San Diego
jg...@uc...


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