From: <ch...@us...> - 2008-08-05 21:19:15
|
Revision: 349 http://proteowizard.svn.sourceforge.net/proteowizard/?rev=349&view=rev Author: chambm Date: 2008-08-05 21:19:21 +0000 (Tue, 05 Aug 2008) Log Message: ----------- - moved VS files up one level to encompass pwiz_tools and pwiz_aux Added Paths: ----------- trunk/pwiz/pwiz.sln trunk/pwiz/pwiz.vcproj Removed Paths: ------------- trunk/pwiz/pwiz/pwiz.sln trunk/pwiz/pwiz/pwiz.vcproj Deleted: trunk/pwiz/pwiz/pwiz.sln =================================================================== --- trunk/pwiz/pwiz/pwiz.sln 2008-08-04 22:26:07 UTC (rev 348) +++ trunk/pwiz/pwiz/pwiz.sln 2008-08-05 21:19:21 UTC (rev 349) @@ -1,27 +0,0 @@ - -Microsoft Visual Studio Solution File, Format Version 9.00 -# Visual Studio 2005 -Project("{8BC9CEB8-8B4A-11D0-8D11-00A0C91BC942}") = "pwiz", "pwiz.vcproj", "{69BD51D3-2BBA-4462-A5A4-FC8EF88A52FD}" - ProjectSection(WebsiteProperties) = preProject - Debug.AspNetCompiler.Debug = "True" - Release.AspNetCompiler.Debug = "False" - EndProjectSection -EndProject -Global - GlobalSection(DPCodeReviewSolutionGUID) = preSolution - DPCodeReviewSolutionGUID = {00000000-0000-0000-0000-000000000000} - EndGlobalSection - GlobalSection(SolutionConfigurationPlatforms) = preSolution - Debug|Win32 = Debug|Win32 - Release|Win32 = Release|Win32 - EndGlobalSection - GlobalSection(ProjectConfigurationPlatforms) = postSolution - {69BD51D3-2BBA-4462-A5A4-FC8EF88A52FD}.Debug|Win32.ActiveCfg = Debug|Win32 - {69BD51D3-2BBA-4462-A5A4-FC8EF88A52FD}.Debug|Win32.Build.0 = Debug|Win32 - {69BD51D3-2BBA-4462-A5A4-FC8EF88A52FD}.Release|Win32.ActiveCfg = Release|Win32 - {69BD51D3-2BBA-4462-A5A4-FC8EF88A52FD}.Release|Win32.Build.0 = Release|Win32 - EndGlobalSection - GlobalSection(SolutionProperties) = preSolution - HideSolutionNode = FALSE - EndGlobalSection -EndGlobal Deleted: trunk/pwiz/pwiz/pwiz.vcproj =================================================================== --- trunk/pwiz/pwiz/pwiz.vcproj 2008-08-04 22:26:07 UTC (rev 348) +++ trunk/pwiz/pwiz/pwiz.vcproj 2008-08-05 21:19:21 UTC (rev 349) @@ -1,2436 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<VisualStudioProject - ProjectType="Visual C++" - Version="8.00" - Name="pwiz" - ProjectGUID="{69BD51D3-2BBA-4462-A5A4-FC8EF88A52FD}" - RootNamespace="pwiz" - Keyword="MakeFileProj" - > - <Platforms> - <Platform - Name="Win32" - /> - </Platforms> - <ToolFiles> - </ToolFiles> - <Configurations> - <Configuration - Name="Debug|Win32" - OutputDirectory="Debug" - IntermediateDirectory="Debug" - ConfigurationType="0" - > - <Tool - Name="VCNMakeTool" - BuildCommandLine="cd $(ProjectDir)\build
bjam debug -q -n" - ReBuildCommandLine="cd $(ProjectDir)\build
bjam debug -a -q" - CleanCommandLine="cd $(ProjectDir)\build
bjam debug clean" - Output="" - PreprocessorDefinitions="WIN32;_DEBUG;" - IncludeSearchPath=""C:\Boost\include\boost-1_34_1"" - ForcedIncludes="" - AssemblySearchPath="" - ForcedUsingAssemblies="" - CompileAsManaged="" - /> - </Configuration> - <Configuration - Name="Release|Win32" - OutputDirectory="Release" - IntermediateDirectory="Release" - ConfigurationType="0" - BuildLogFile="build\$(IntDir)\BuildLog.htm" - > - <Tool - Name="VCNMakeTool" - BuildCommandLine="cd $(ProjectDir)\build
bjam release -q" - ReBuildCommandLine="cd $(ProjectDir)\build
bjam release -a -q" - CleanCommandLine="cd $(ProjectDir)\build
bjam release clean -a -q" - Output="" - PreprocessorDefinitions="WIN32;NDEBUG;" - IncludeSearchPath="" - ForcedIncludes="" - AssemblySearchPath="" - ForcedUsingAssemblies="" - CompileAsManaged="" - /> - </Configuration> - </Configurations> - <References> - </References> - <Files> - <Filter - Name="Header Files" - Filter="h;hpp;hxx;hm;inl;inc;xsd" - UniqueIdentifier="{93995380-89BD-4b04-88EB-625FBE52EBFB}" - > - <File - RelativePath=".\pwiz\utility\proteome\AminoAcid.hpp" - > - </File> - <File - RelativePath=".\utility\proteome\AminoAcid.hpp" - > - </File> - <File - RelativePath=".\utility\proteome\auto_vector.h" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\auto_vector.h" - > - </File> - <File - RelativePath=".\utility\misc\Base64.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\Base64.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\BinaryDataEncoder.hpp" - > - </File> - <File - RelativePath=".\data\msdata\BinaryDataEncoder.hpp" - > - </File> - <File - RelativePath=".\data\misc\CalibrationParameters.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\misc\CalibrationParameters.hpp" - > - </File> - <File - RelativePath=".\utility\proteome\Chemistry.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\Chemistry.hpp" - > - </File> - <File - RelativePath=".\utility\proteome\ChemistryData.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\ChemistryData.hpp" - > - </File> - <File - RelativePath=".\data\msdata\ChromatogramList_mzML.hpp" - > - </File> - <File - RelativePath=".\analysis\spectrum_processing\ChromatogramList_SavitzkyGolaySmoother.hpp" - > - </File> - <File - RelativePath=".\data\vendor_readers\ChromatogramList_Thermo.hpp" - > - </File> - <File - RelativePath=".\analysis\spectrum_processing\ChromatogramListWrapper.hpp" - > - </File> - <File - RelativePath=".\utility\misc\Container.hpp" - > - </File> - <File - RelativePath=".\utility\bindings\CLI\cv.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\cv.hpp" - > - </File> - <File - RelativePath=".\data\msdata\cv.hpp" - > - </File> - <File - RelativePath=".\build\data\msdata\msvc-8.0\release\link-static\threading-multi\cv.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\CVParam.hpp" - > - </File> - <File - RelativePath=".\utility\bindings\CLI\CVParam.hpp" - > - </File> - <File - RelativePath=".\data\msdata\CVParam.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\CVTranslator.hpp" - > - </File> - <File - RelativePath=".\data\msdata\CVTranslator.hpp" - > - </File> - <File - RelativePath=".\data\msdata\DefaultReaderList.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\DefaultReaderList.hpp" - > - </File> - <File - RelativePath=".\analysis\frequency\DerivativeTest.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\DerivativeTest.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\Diff.hpp" - > - </File> - <File - RelativePath=".\data\msdata\Diff.hpp" - > - </File> - <File - RelativePath=".\utility\misc\endian.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\endian.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\erf.hpp" - > - </File> - <File - RelativePath=".\utility\math\erf.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\examples.hpp" - > - </File> - <File - RelativePath=".\data\msdata\examples.hpp" - > - </File> - <File - RelativePath=".\utility\bindings\CLI\examples.hpp" - > - </File> - <File - RelativePath=".\utility\misc\Exception.hpp" - > - </File> - <File - RelativePath=".\utility\misc\Export.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\vendor_readers\ExtendedReaderList.hpp" - > - </File> - <File - RelativePath=".\data\vendor_readers\ExtendedReaderList.hpp" - > - </File> - <File - RelativePath=".\utility\misc\Filesystem.hpp" - > - </File> - <File - RelativePath=".\data\misc\FrequencyData.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\misc\FrequencyData.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\misc\FrequencyDataTestData.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\FrequencyEstimator.hpp" - > - </File> - <File - RelativePath=".\analysis\frequency\FrequencyEstimator.hpp" - > - </File> - <File - RelativePath=".\analysis\frequency\FrequencyEstimatorPhysicalModel.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\FrequencyEstimatorPhysicalModel.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\FrequencyEstimatorSimple.hpp" - > - </File> - <File - RelativePath=".\analysis\frequency\FrequencyEstimatorSimple.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\HouseholderQR.hpp" - > - </File> - <File - RelativePath=".\utility\math\HouseholderQR.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\Image.hpp" - > - </File> - <File - RelativePath=".\utility\misc\Image.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\IntegerSet.hpp" - > - </File> - <File - RelativePath=".\utility\misc\IntegerSet.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\IO.hpp" - > - </File> - <File - RelativePath=".\data\msdata\IO.hpp" - > - </File> - <File - RelativePath=".\utility\proteome\Ion.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\Ion.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\IPIFASTADatabase.hpp" - > - </File> - <File - RelativePath=".\utility\proteome\IPIFASTADatabase.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\IsotopeCalculator.hpp" - > - </File> - <File - RelativePath=".\utility\proteome\IsotopeCalculator.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\IsotopeEnvelopeEstimator.hpp" - > - </File> - <File - RelativePath=".\utility\proteome\IsotopeEnvelopeEstimator.hpp" - > - </File> - <File - RelativePath=".\utility\proteome\IsotopeTable.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\IsotopeTable.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\LegacyAdapter.hpp" - > - </File> - <File - RelativePath=".\data\msdata\LegacyAdapter.hpp" - > - </File> - <File - RelativePath=".\utility\math\LinearLeastSquares.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\LinearLeastSquares.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\LinearSolver.hpp" - > - </File> - <File - RelativePath=".\utility\math\LinearSolver.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\MagnitudeLorentzian.hpp" - > - </File> - <File - RelativePath=".\analysis\frequency\MagnitudeLorentzian.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\MagnitudeLorentzianTestData.hpp" - > - </File> - <File - RelativePath=".\utility\math\MatchedFilter.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\MatchedFilter.hpp" - > - </File> - <File - RelativePath=".\analysis\passive\MetadataReporter.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\MetadataReporter.hpp" - > - </File> - <File - RelativePath=".\utility\bindings\CLI\MSData.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\MSData.hpp" - > - </File> - <File - RelativePath=".\data\msdata\MSData.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\MSDataAnalyzer.hpp" - > - </File> - <File - RelativePath=".\analysis\passive\MSDataAnalyzer.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\MSDataAnalyzerApplication.hpp" - > - </File> - <File - RelativePath=".\analysis\passive\MSDataAnalyzerApplication.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\MSDataCache.hpp" - > - </File> - <File - RelativePath=".\analysis\passive\MSDataCache.hpp" - > - </File> - <File - RelativePath=".\utility\bindings\CLI\MSDataFile.hpp" - > - </File> - <File - RelativePath=".\data\msdata\MSDataFile.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\MSDataFile.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\mt19937ar.h" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\obo.hpp" - > - </File> - <File - RelativePath=".\data\msdata\obo.hpp" - > - </File> - <File - RelativePath=".\utility\misc\optimized_lexical_cast.hpp" - > - </File> - <File - RelativePath=".\utility\math\Parabola.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\Parabola.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\ParameterEstimator.hpp" - > - </File> - <File - RelativePath=".\analysis\frequency\ParameterEstimator.hpp" - > - </File> - <File - RelativePath=".\analysis\frequency\ParametrizedFunction.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\ParametrizedFunction.hpp" - > - </File> - <File - RelativePath=".\data\misc\PeakData.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\misc\PeakData.hpp" - > - </File> - <File - RelativePath=".\analysis\frequency\PeakDetector.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\peakdetect\PeakDetector.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\PeakDetector.hpp" - > - </File> - <File - RelativePath=".\analysis\peakdetect\PeakDetector.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\PeakDetectorMatchedFilter.hpp" - > - </File> - <File - RelativePath=".\analysis\frequency\PeakDetectorMatchedFilter.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\PeakDetectorMatchedFilterTestData.hpp" - > - </File> - <File - RelativePath=".\analysis\frequency\PeakDetectorNaive.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\PeakDetectorNaive.hpp" - > - </File> - <File - RelativePath=".\analysis\peakdetect\PeakFamilyDetector.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\peakdetect\PeakFamilyDetector.hpp" - > - </File> - <File - RelativePath=".\analysis\peakdetect\PeakFamilyDetectorFT.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\peakdetect\PeakFamilyDetectorFT.hpp" - > - </File> - <File - RelativePath=".\utility\proteome\Peptide.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\Peptide.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\PeptideDatabase.hpp" - > - </File> - <File - RelativePath=".\utility\proteome\PeptideDatabase.hpp" - > - </File> - <File - RelativePath=".\analysis\peptideid\PeptideID.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\peptideid\PeptideID.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\peptideid\PeptideID_pepXML.hpp" - > - </File> - <File - RelativePath=".\analysis\peptideid\PeptideID_pepXML.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\peptideid\PeptideIDMap.hpp" - > - </File> - <File - RelativePath=".\analysis\peptideid\PeptideIDMap.hpp" - > - </File> - <File - RelativePath=".\analysis\passive\Pseudo2DGel.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\Pseudo2DGel.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\qr.hpp" - > - </File> - <File - RelativePath=".\utility\math\qr.hpp" - > - </File> - <File - RelativePath=".\data\msdata\ramp\ramp.h" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\ramp\ramp.h" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\RAMPAdapter.hpp" - > - </File> - <File - RelativePath=".\data\msdata\RAMPAdapter.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\Random.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\vendor_api\thermo\RawFile.h" - > - </File> - <File - RelativePath=".\utility\vendor_api\thermo\RawFile.h" - > - </File> - <File - RelativePath=".\utility\vendor_api\thermo\RawFileCOM.h" - > - </File> - <File - RelativePath=".\pwiz\utility\vendor_api\thermo\RawFileCOM.h" - > - </File> - <File - RelativePath=".\utility\vendor_api\thermo\RawFileTypes.h" - > - </File> - <File - RelativePath=".\pwiz\utility\vendor_api\thermo\RawFileValues.h" - > - </File> - <File - RelativePath=".\utility\vendor_api\thermo\RawFileValues.h" - > - </File> - <File - RelativePath=".\data\msdata\Reader.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\Reader.hpp" - > - </File> - <File - RelativePath=".\utility\bindings\CLI\Reader.hpp" - > - </File> - <File - RelativePath=".\data\vendor_readers\Reader_Thermo.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\vendor_readers\Reader_Thermo.hpp" - > - </File> - <File - RelativePath=".\data\vendor_readers\Reader_Thermo_Detail.hpp" - > - </File> - <File - RelativePath=".\data\msdata\References.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\References.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\RegionAnalyzer.hpp" - > - </File> - <File - RelativePath=".\analysis\passive\RegionAnalyzer.hpp" - > - </File> - <File - RelativePath=".\analysis\passive\RegionSIC.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\RegionSIC.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\RegionSlice.hpp" - > - </File> - <File - RelativePath=".\analysis\passive\RegionSlice.hpp" - > - </File> - <File - RelativePath=".\analysis\passive\RegionTIC.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\RegionTIC.hpp" - > - </File> - <File - RelativePath=".\utility\math\round.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\round.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\misc\SampleDatum.hpp" - > - </File> - <File - RelativePath=".\data\misc\SampleDatum.hpp" - > - </File> - <File - RelativePath=".\analysis\spectrum_processing\SavitzkyGolaySmoother.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\minimxml\SAXParser.hpp" - > - </File> - <File - RelativePath=".\utility\minimxml\SAXParser.hpp" - > - </File> - <File - RelativePath=".\utility\vendor_api\thermo\ScanFilter.h" - > - </File> - <File - RelativePath=".\pwiz\utility\vendor_api\thermo\ScanFilter.h" - > - </File> - <File - RelativePath=".\pwiz\data\misc\scoped_array.hpp" - > - </File> - <File - RelativePath=".\data\misc\scoped_array.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\Serializer_mzML.hpp" - > - </File> - <File - RelativePath=".\data\msdata\Serializer_mzML.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\Serializer_mzXML.hpp" - > - </File> - <File - RelativePath=".\data\msdata\Serializer_mzXML.hpp" - > - </File> - <File - RelativePath=".\utility\misc\SHA1.h" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\SHA1.h" - > - </File> - <File - RelativePath=".\utility\misc\SHA1_ostream.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\SHA1_ostream.hpp" - > - </File> - <File - RelativePath=".\utility\misc\SHA1Calculator.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\SHA1Calculator.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\SHA1OutputObserver.hpp" - > - </File> - <File - RelativePath=".\data\msdata\SHA1OutputObserver.hpp" - > - </File> - <File - RelativePath=".\analysis\passive\SpectrumBinaryData.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\SpectrumBinaryData.hpp" - > - </File> - <File - RelativePath=".\analysis\passive\SpectrumInfo.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\SpectrumInfo.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\SpectrumIterator.hpp" - > - </File> - <File - RelativePath=".\data\msdata\SpectrumIterator.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\SpectrumList_mzML.hpp" - > - </File> - <File - RelativePath=".\data\msdata\SpectrumList_mzML.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\SpectrumList_mzXML.hpp" - > - </File> - <File - RelativePath=".\data\msdata\SpectrumList_mzXML.hpp" - > - </File> - <File - RelativePath=".\analysis\spectrum_processing\SpectrumList_NativeCentroider.hpp" - > - </File> - <File - RelativePath=".\utility\bindings\CLI\SpectrumList_NativeCentroider.hpp" - > - </File> - <File - RelativePath=".\analysis\spectrum_processing\SpectrumList_SavitzkyGolaySmoother.hpp" - > - </File> - <File - RelativePath=".\utility\bindings\CLI\SpectrumList_SavitzkyGolaySmoother.hpp" - > - </File> - <File - RelativePath=".\data\vendor_readers\SpectrumList_Thermo.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\SpectrumListFilter.hpp" - > - </File> - <File - RelativePath=".\data\msdata\SpectrumListFilter.hpp" - > - </File> - <File - RelativePath=".\utility\bindings\CLI\SpectrumListWrapper.hpp" - > - </File> - <File - RelativePath=".\analysis\spectrum_processing\SpectrumListWrapper.hpp" - > - </File> - <File - RelativePath=".\analysis\passive\SpectrumTable.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\SpectrumTable.hpp" - > - </File> - <File - RelativePath=".\utility\math\Stats.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\Stats.hpp" - > - </File> - <File - RelativePath=".\utility\misc\String.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\TextWriter.hpp" - > - </File> - <File - RelativePath=".\data\msdata\TextWriter.hpp" - > - </File> - <File - RelativePath=".\utility\misc\Timer.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\Timer.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\misc\TransientData.hpp" - > - </File> - <File - RelativePath=".\data\misc\TransientData.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\TruncatedLorentzian.hpp" - > - </File> - <File - RelativePath=".\analysis\frequency\TruncatedLorentzian.hpp" - > - </File> - <File - RelativePath=".\analysis\frequency\TruncatedLorentzianEstimator.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\TruncatedLorentzianEstimator.hpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\TruncatedLorentzianParameters.hpp" - > - </File> - <File - RelativePath=".\analysis\frequency\TruncatedLorentzianParameters.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\Types.hpp" - > - </File> - <File - RelativePath=".\utility\math\Types.hpp" - > - </File> - <File - RelativePath=".\utility\misc\unit.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\unit.hpp" - > - </File> - <File - RelativePath=".\utility\minimxml\XMLWriter.hpp" - > - </File> - <File - RelativePath=".\pwiz\utility\minimxml\XMLWriter.hpp" - > - </File> - </Filter> - <Filter - Name="Resource Files" - Filter="rc;ico;cur;bmp;dlg;rc2;rct;bin;rgs;gif;jpg;jpeg;jpe;resx" - UniqueIdentifier="{67DA6AB6-F800-4c08-8B7A-83BB121AAD01}" - > - </Filter> - <Filter - Name="Source Files" - Filter="cpp;c;cc;cxx;def;odl;idl;hpj;bat;asm;asmx" - UniqueIdentifier="{4FC737F1-C7A5-4376-A066-2A32D752A2FF}" - > - <File - RelativePath=".\pwiz\utility\proteome\AminoAcid.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\AminoAcid.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\AminoAcidTest.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\AminoAcidTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\Base64.cpp" - > - </File> - <File - RelativePath=".\utility\misc\Base64.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\Base64Test.cpp" - > - </File> - <File - RelativePath=".\utility\misc\Base64Test.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\BinaryDataEncoder.cpp" - > - </File> - <File - RelativePath=".\data\msdata\BinaryDataEncoder.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\BinaryDataEncoderTest.cpp" - > - </File> - <File - RelativePath=".\data\msdata\BinaryDataEncoderTest.cpp" - > - </File> - <File - RelativePath=".\data\misc\CalibrationParametersTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\misc\CalibrationParametersTest.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\Chemistry.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\Chemistry.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\ChemistryData.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\ChemistryData.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\ChemistryTest.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\ChemistryTest.cpp" - > - </File> - <File - RelativePath=".\data\msdata\ChromatogramList_mzML.cpp" - > - </File> - <File - RelativePath=".\data\msdata\ChromatogramList_mzML_Test.cpp" - > - </File> - <File - RelativePath=".\analysis\spectrum_processing\ChromatogramList_SavitzkyGolaySmoother.cpp" - > - </File> - <File - RelativePath=".\data\vendor_readers\ChromatogramList_Thermo.cpp" - > - </File> - <File - RelativePath=".\build\data\msdata\msvc-8.0\release\link-static\threading-multi\cv.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\cv.cpp" - > - </File> - <File - RelativePath=".\data\msdata\cv.cpp" - > - </File> - <File - RelativePath=".\data\msdata\cvgen.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\cvgen.cpp" - > - </File> - <File - RelativePath=".\utility\bindings\CLI\CVParam.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\CVParam.cpp" - > - </File> - <File - RelativePath=".\data\msdata\CVParam.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\CVParamTest.cpp" - > - </File> - <File - RelativePath=".\data\msdata\CVParamTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\cvtest.cpp" - > - </File> - <File - RelativePath=".\data\msdata\cvtest.cpp" - > - </File> - <File - RelativePath=".\data\msdata\CVTranslator.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\CVTranslator.cpp" - > - </File> - <File - RelativePath=".\data\msdata\CVTranslatorTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\CVTranslatorTest.cpp" - > - </File> - <File - RelativePath=".\data\msdata\DefaultReaderList.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\DefaultReaderList.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\Diff.cpp" - > - </File> - <File - RelativePath=".\data\msdata\Diff.cpp" - > - </File> - <File - RelativePath=".\data\msdata\DiffTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\DiffTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\vendor_api\thermo\DllMain.cpp" - > - </File> - <File - RelativePath=".\utility\vendor_api\thermo\DllMain.cpp" - > - </File> - <File - RelativePath=".\utility\misc\endian_test.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\endian_test.cpp" - > - </File> - <File - RelativePath=".\utility\math\erf.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\erf.cpp" - > - </File> - <File - RelativePath=".\utility\math\erfTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\erfTest.cpp" - > - </File> - <File - RelativePath=".\utility\bindings\CLI\examples.cpp" - > - </File> - <File - RelativePath=".\data\msdata\examples.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\examples.cpp" - > - </File> - <File - RelativePath=".\data\vendor_readers\ExtendedReaderList.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\vendor_readers\ExtendedReaderList.cpp" - > - </File> - <File - RelativePath=".\utility\misc\Filesystem.cpp" - > - </File> - <File - RelativePath=".\utility\misc\FilesystemTest.cpp" - > - </File> - <File - RelativePath=".\data\misc\FrequencyData.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\misc\FrequencyData.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\misc\FrequencyDataTest.cpp" - > - </File> - <File - RelativePath=".\data\misc\FrequencyDataTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\misc\FrequencyDataTestData.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\FrequencyEstimatorPhysicalModel.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\FrequencyEstimatorPhysicalModel.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\FrequencyEstimatorPhysicalModelTest.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\FrequencyEstimatorPhysicalModelTest.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\FrequencyEstimatorSimple.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\FrequencyEstimatorSimple.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\FrequencyEstimatorSimpleTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\FrequencyEstimatorSimpleTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\tools\hello_analyzer.cpp" - > - </File> - <File - RelativePath=".\examples\hello_analyzer.cpp" - > - </File> - <File - RelativePath=".\examples\hello_analyzer_2.cpp" - > - </File> - <File - RelativePath=".\pwiz\tools\hello_analyzer_2.cpp" - > - </File> - <File - RelativePath=".\pwiz\tools\hello_msdata.cpp" - > - </File> - <File - RelativePath=".\examples\hello_msdata.cpp" - > - </File> - <File - RelativePath=".\examples\hello_ramp.cpp" - > - </File> - <File - RelativePath=".\pwiz\tools\hello_ramp.cpp" - > - </File> - <File - RelativePath=".\utility\math\HouseholderQRTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\HouseholderQRTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\Image.cpp" - > - </File> - <File - RelativePath=".\utility\misc\Image.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\IntegerSet.cpp" - > - </File> - <File - RelativePath=".\utility\misc\IntegerSet.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\IntegerSetTest.cpp" - > - </File> - <File - RelativePath=".\utility\misc\IntegerSetTest.cpp" - > - </File> - <File - RelativePath=".\data\msdata\IO.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\IO.cpp" - > - </File> - <File - RelativePath=".\data\msdata\IOTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\IOTest.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\IPIFASTADatabase.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\IPIFASTADatabase.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\IPIFASTADatabaseTest.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\IPIFASTADatabaseTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\iso.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\iso.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\IsotopeCalculator.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\IsotopeCalculator.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\IsotopeCalculatorTest.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\IsotopeCalculatorTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\IsotopeEnvelopeEstimator.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\IsotopeEnvelopeEstimator.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\IsotopeEnvelopeEstimatorTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\IsotopeEnvelopeEstimatorTest.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\IsotopeTable.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\IsotopeTable.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\IsotopeTableTest.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\IsotopeTableTest.cpp" - > - </File> - <File - RelativePath=".\data\msdata\LegacyAdapter.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\LegacyAdapter.cpp" - > - </File> - <File - RelativePath=".\data\msdata\LegacyAdapterTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\LegacyAdapterTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\LinearLeastSquaresTest.cpp" - > - </File> - <File - RelativePath=".\utility\math\LinearLeastSquaresTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\LinearSolverTest.cpp" - > - </File> - <File - RelativePath=".\utility\math\LinearSolverTest.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\MagnitudeLorentzian.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\MagnitudeLorentzian.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\MagnitudeLorentzianTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\MagnitudeLorentzianTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\MagnitudeLorentzianTestData.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\MatchedFilterTest.cpp" - > - </File> - <File - RelativePath=".\utility\math\MatchedFilterTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\MetadataReporter.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\MetadataReporter.cpp" - > - </File> - <File - RelativePath=".\tools\msaccess.cpp" - > - </File> - <File - RelativePath=".\pwiz\tools\msaccess.cpp" - > - </File> - <File - RelativePath=".\examples\mscat.cpp" - > - </File> - <File - RelativePath=".\pwiz\tools\msconvert.cpp" - > - </File> - <File - RelativePath=".\tools\msconvert.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\MSData.cpp" - > - </File> - <File - RelativePath=".\data\msdata\MSData.cpp" - > - </File> - <File - RelativePath=".\utility\bindings\CLI\MSData.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\MSDataAnalyzer.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\MSDataAnalyzer.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\MSDataAnalyzerApplication.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\MSDataAnalyzerApplication.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\MSDataAnalyzerApplicationTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\MSDataAnalyzerApplicationTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\MSDataAnalyzerTest.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\MSDataAnalyzerTest.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\MSDataCache.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\MSDataCache.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\MSDataCacheTest.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\MSDataCacheTest.cpp" - > - </File> - <File - RelativePath=".\utility\bindings\CLI\MSDataFile.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\MSDataFile.cpp" - > - </File> - <File - RelativePath=".\data\msdata\MSDataFile.cpp" - > - </File> - <File - RelativePath=".\data\msdata\MSDataFileTest.cpp" - > - </File> - <File - RelativePath=".\utility\bindings\CLI\MSDataFileTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\MSDataFileTest.cpp" - > - </File> - <File - RelativePath=".\utility\bindings\CLI\MSDataTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\MSDataTest.cpp" - > - </File> - <File - RelativePath=".\data\msdata\MSDataTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\tools\msdiff.cpp" - > - </File> - <File - RelativePath=".\tools\msdiff.cpp" - > - </File> - <File - RelativePath=".\tools\mspicture.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\mt19937ar.cpp" - > - </File> - <File - RelativePath=".\data\msdata\obo.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\obo.cpp" - > - </File> - <File - RelativePath=".\data\msdata\obotest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\obotest.cpp" - > - </File> - <File - RelativePath=".\utility\math\Parabola.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\Parabola.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\ParabolaTest.cpp" - > - </File> - <File - RelativePath=".\utility\math\ParabolaTest.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\ParameterEstimator.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\ParameterEstimator.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\ParametrizedFunctionTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\ParametrizedFunctionTest.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\parse_isotopes.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\parse_isotopes.cpp" - > - </File> - <File - RelativePath=".\data\misc\PeakData.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\misc\PeakData.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\misc\PeakDataTest.cpp" - > - </File> - <File - RelativePath=".\data\misc\PeakDataTest.cpp" - > - </File> - <File - RelativePath=".\analysis\peakdetect\PeakDetector.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\peakdetect\PeakDetector.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\PeakDetectorMatchedFilter.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\PeakDetectorMatchedFilter.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\PeakDetectorMatchedFilterTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\PeakDetectorMatchedFilterTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\PeakDetectorMatchedFilterTestData.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\PeakDetectorNaive.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\PeakDetectorNaive.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\PeakDetectorNaiveTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\PeakDetectorNaiveTest.cpp" - > - </File> - <File - RelativePath=".\analysis\peakdetect\PeakFamilyDetector.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\peakdetect\PeakFamilyDetector.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\peakdetect\PeakFamilyDetectorFT.cpp" - > - </File> - <File - RelativePath=".\analysis\peakdetect\PeakFamilyDetectorFT.cpp" - > - </File> - <File - RelativePath=".\analysis\peakdetect\PeakFamilyDetectorFTTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\peakdetect\PeakFamilyDetectorFTTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\peakdetect\PeakFamilyDetectorFTTestData.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\pepdb.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\pepdb.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\Peptide.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\Peptide.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\PeptideDatabase.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\PeptideDatabase.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\PeptideDatabaseTest.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\PeptideDatabaseTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\peptideid\PeptideID_pepXML.cpp" - > - </File> - <File - RelativePath=".\analysis\peptideid\PeptideID_pepXML.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\peptideid\PeptideID_pepXMLTest.cpp" - > - </File> - <File - RelativePath=".\analysis\peptideid\PeptideID_pepXMLTest.cpp" - > - </File> - <File - RelativePath=".\analysis\peptideid\PeptideIDMap.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\peptideid\PeptideIDMap.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\peptideid\PeptideIDMapTest.cpp" - > - </File> - <File - RelativePath=".\analysis\peptideid\PeptideIDMapTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\proteome\PeptideTest.cpp" - > - </File> - <File - RelativePath=".\utility\proteome\PeptideTest.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\Pseudo2DGel.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\Pseudo2DGel.cpp" - > - </File> - <File - RelativePath=".\utility\math\qrTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\qrTest.cpp" - > - </File> - <File - RelativePath=".\data\msdata\RAMPAdapter.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\RAMPAdapter.cpp" - > - </File> - <File - RelativePath=".\data\msdata\RAMPAdapterTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\RAMPAdapterTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\Random.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\vendor_api\thermo\RawFile.cpp" - > - </File> - <File - RelativePath=".\utility\vendor_api\thermo\RawFile.cpp" - > - </File> - <File - RelativePath=".\utility\vendor_api\thermo\RawFileTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\vendor_api\thermo\RawFileTest.cpp" - > - </File> - <File - RelativePath=".\utility\vendor_api\thermo\RawFileValues.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\vendor_api\thermo\RawFileValues.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\Reader.cpp" - > - </File> - <File - RelativePath=".\data\msdata\Reader.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\vendor_readers\Reader_Thermo.cpp" - > - </File> - <File - RelativePath=".\data\vendor_readers\Reader_Thermo.cpp" - > - </File> - <File - RelativePath=".\data\vendor_readers\Reader_Thermo_Detail.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\vendor_readers\Reader_Thermo_Test.cpp" - > - </File> - <File - RelativePath=".\data\vendor_readers\Reader_Thermo_Test.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\ReaderTest.cpp" - > - </File> - <File - RelativePath=".\data\msdata\ReaderTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\References.cpp" - > - </File> - <File - RelativePath=".\data\msdata\References.cpp" - > - </File> - <File - RelativePath=".\data\msdata\ReferencesTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\ReferencesTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\RegionAnalyzer.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\RegionAnalyzer.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\RegionAnalyzerTest.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\RegionAnalyzerTest.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\RegionSIC.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\RegionSIC.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\RegionSlice.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\RegionSlice.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\RegionTIC.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\RegionTIC.cpp" - > - </File> - <File - RelativePath=".\data\misc\SampleDatumTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\misc\SampleDatumTest.cpp" - > - </File> - <File - RelativePath=".\analysis\spectrum_processing\SavitzkyGolaySmootherTest.cpp" - > - </File> - <File - RelativePath=".\utility\minimxml\SAXParser.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\minimxml\SAXParser.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\minimxml\SAXParserTest.cpp" - > - </File> - <File - RelativePath=".\utility\minimxml\SAXParserTest.cpp" - > - </File> - <File - RelativePath=".\utility\vendor_api\thermo\ScanFilter.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\vendor_api\thermo\ScanFilter.cpp" - > - </File> - <File - RelativePath=".\utility\vendor_api\thermo\ScanFilterTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\vendor_api\thermo\ScanFilterTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\Serializer_mzML.cpp" - > - </File> - <File - RelativePath=".\data\msdata\Serializer_mzML.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\Serializer_mzML_Test.cpp" - > - </File> - <File - RelativePath=".\data\msdata\Serializer_mzML_Test.cpp" - > - </File> - <File - RelativePath=".\data\msdata\Serializer_mzXML.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\Serializer_mzXML.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\Serializer_mzXML_Test.cpp" - > - </File> - <File - RelativePath=".\data\msdata\Serializer_mzXML_Test.cpp" - > - </File> - <File - RelativePath=".\utility\misc\SHA1.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\SHA1.cpp" - > - </File> - <File - RelativePath=".\utility\misc\SHA1_ostream_test.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\SHA1_ostream_test.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\sha1calc.cpp" - > - </File> - <File - RelativePath=".\utility\misc\sha1calc.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\SHA1Calculator.cpp" - > - </File> - <File - RelativePath=".\utility\misc\SHA1Calculator.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\misc\SHA1CalculatorTest.cpp" - > - </File> - <File - RelativePath=".\utility\misc\SHA1CalculatorTest.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\SpectrumBinaryData.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\SpectrumBinaryData.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\SpectrumInfo.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\SpectrumInfo.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\SpectrumInfoTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\SpectrumInfoTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\SpectrumIterator.cpp" - > - </File> - <File - RelativePath=".\data\msdata\SpectrumIterator.cpp" - > - </File> - <File - RelativePath=".\data\msdata\SpectrumIteratorTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\SpectrumIteratorTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\SpectrumList_mzML.cpp" - > - </File> - <File - RelativePath=".\data\msdata\SpectrumList_mzML.cpp" - > - </File> - <File - RelativePath=".\data\msdata\SpectrumList_mzML_Test.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\SpectrumList_mzML_Test.cpp" - > - </File> - <File - RelativePath=".\data\msdata\SpectrumList_mzXML.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\SpectrumList_mzXML.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\SpectrumList_mzXML_Test.cpp" - > - </File> - <File - RelativePath=".\data\msdata\SpectrumList_mzXML_Test.cpp" - > - </File> - <File - RelativePath=".\analysis\spectrum_processing\SpectrumList_NativeCentroider.cpp" - > - </File> - <File - RelativePath=".\analysis\spectrum_processing\SpectrumList_SavitzkyGolaySmoother.cpp" - > - </File> - <File - RelativePath=".\data\vendor_readers\SpectrumList_Thermo.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\SpectrumListFilter.cpp" - > - </File> - <File - RelativePath=".\data\msdata\SpectrumListFilter.cpp" - > - </File> - <File - RelativePath=".\data\msdata\SpectrumListFilterTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\SpectrumListFilterTest.cpp" - > - </File> - <File - RelativePath=".\analysis\spectrum_processing\SpectrumListWrapperTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\passive\SpectrumTable.cpp" - > - </File> - <File - RelativePath=".\analysis\passive\SpectrumTable.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\Stats.cpp" - > - </File> - <File - RelativePath=".\utility\math\Stats.cpp" - > - </File> - <File - RelativePath=".\utility\math\StatsTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\math\StatsTest.cpp" - > - </File> - <File - RelativePath=".\utility\misc\Stream.hpp" - > - </File> - <File - RelativePath=".\pwiz\data\misc\TransientData.cpp" - > - </File> - <File - RelativePath=".\data\misc\TransientData.cpp" - > - </File> - <File - RelativePath=".\data\misc\TransientDataTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\data\misc\TransientDataTest.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\TruncatedLorentzian.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\TruncatedLorentzian.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\TruncatedLorentzianEstimator.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\TruncatedLorentzianEstimator.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\TruncatedLorentzianParameters.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\TruncatedLorentzianParameters.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\TruncatedLorentzianParametersTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\TruncatedLorentzianParametersTest.cpp" - > - </File> - <File - RelativePath=".\pwiz\analysis\frequency\TruncatedLorentzianTest.cpp" - > - </File> - <File - RelativePath=".\analysis\frequency\TruncatedLorentzianTest.cpp" - > - </File> - <File - RelativePath=".\examples\txt2mzml.cpp" - > - </File> - <File - RelativePath=".\utility\vendor_api\thermo\xdktest\xdktest.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\vendor_api\thermo\xdktest\xdktest.cpp" - > - </File> - <File - RelativePath=".\utility\minimxml\XMLWriter.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\minimxml\XMLWriter.cpp" - > - </File> - <File - RelativePath=".\pwiz\utility\minimxml\XMLWriterTest.cpp" - > - </File> - <File - RelativePath=".\utility\minimxml\XMLWriterTest.cpp" - > - </File> - </Filter> - <File - RelativePath=".\utility\bindings\CLI\Jamfile.jam" - > - </File> - <File - RelativePath=".\analysis\passive\Jamfile.jam" - > - </File> - <File - RelativePath=".\analysis\frequency\Jamfile.jam" - > - </File> - <File - RelativePath=".\analysis\peakdetect\Jamfile.jam" - > - </File> - <File - RelativePath=".\analysis\Jamfile.jam" - > - </File> - <File - RelativePath=".\build\Jamfile.jam" - > - </File> - <File - RelativePath=".\data\misc\Jamfile.jam" - > - </File> - <File - RelativePath=".\data\msdata\Jamfile.jam" - > - </File> - <File - RelativePath=".\data\vendor_readers\Jamfile.jam" - > - </File> - <File - RelativePath=".\tools\Jamfile.jam" - > - </File> - <File - RelativePath=".\examples\Jamfile.jam" - > - </File> - <File - RelativePath=".\data\Jamfile.jam" - > - </File> - <File - RelativePath=".\utility\math\Jamfile.jam" - > - </File> - <File - RelativePath=".\utility\bindings\Jamfile.jam" - > - </File> - <File - RelativePath=".\utility\minimxml\Jamfile.jam" - > - </File> - <File - RelativePath=".\utility\Jamfile.jam" - > - </File> - <File - RelativePath=".\utility\vendor_api\thermo\Jamfile.jam" - > - </File> - <File - RelativePath=".\utility\vendor_api\Jamfile.jam" - > - </File> - <File - RelativePath=".\utility\proteome\Jamfile.jam" - > - </File> - <File - RelativePath=".\utility\misc\Jamfile.jam" - > - </File> - <File - RelativePath=".\pwiz\data\msdata\ref\mzml_notes.html" - > - </File> - </Files> - <Globals> - </Globals> -</VisualStudioProject> Added: trunk/pwiz/pwiz.sln =================================================================== --- trunk/pwiz/pwiz.sln (rev 0) +++ trunk/pwiz/pwiz.sln 2008-08-05 21:19:21 UTC (rev 349) @@ -0,0 +1,27 @@ + +Microsoft Visual Studio Solution File, Format Version 9.00 +# Visual Studio 2005 +Project("{8BC9CEB8-8B4A-11D0-8D11-00A0C91BC942}") = "pwiz", "pwiz.vcproj", "{69BD51D3-2BBA-4462-A5A4-FC8EF88A52FD}" + ProjectSection(WebsiteProperties) = preProject + Debug.AspNetCompiler.Debug = "True" + Release.AspNetCompiler.Debug = "False" + EndProjectSection +EndProject +Global + GlobalSection(DPCodeReviewSolutionGUID) = preSolution + DPCodeReviewSolutionGUID = {00000000-0000-0000-0000-000000000000} + EndGlobalSection + GlobalSection(SolutionConfigurationPlatforms) = preSolution + Debug|Win32 = Debug|Win32 + Release|Win32 = Release|Win32 + EndGlobalSection + GlobalSection(ProjectConfigurationPlatforms) = postSolution + {69BD51D3-2BBA-4462-A5A4-FC8EF88A52FD}.Debug|Win32.ActiveCfg = Debug|Win32 + {69BD51D3-2BBA-4462-A5A4-FC8EF88A52FD}.Debug|Win32.Build.0 = Debug|Win32 + {69BD51D3-2BBA-4462-A5A4-FC8EF88A52FD}.Release|Win32.ActiveCfg = Release|Win32 + {69BD51D3-2BBA-4462-A5A4-FC8EF88A52FD}.Release|Win32.Build.0 = Release|Win32 + EndGlobalSection + GlobalSection(SolutionProperties) = preSolution + HideSolutionNode = FALSE + EndGlobalSection +EndGlobal Added: trunk/pwiz/pwiz.vcproj =================================================================== --- trunk/pwiz/pwiz.vcproj (rev 0) +++ trunk/pwiz/pwiz.vcproj 2008-08-05 21:19:21 UTC (rev 349) @@ -0,0 +1,2840 @@ +<?xml version="1.0" encoding="UTF-8"?> +<VisualStudioProject + ProjectType="Visual C++" + Version="8.00" + Name="pwiz" + ProjectGUID="{69BD51D3-2BBA-4462-A5A4-FC8EF88A52FD}" + RootNamespace="pwiz" + Keyword="MakeFileProj" + > + <Platforms> + <Platform + Name="Win32" + /> + </Platforms> + <ToolFiles> + </ToolFiles> + <Configurations> + <Configuration + Name="Debug|Win32" + OutputDirectory="Debug" + IntermediateDirectory="Debug" + ConfigurationType="0" + > + <Tool + Name="VCNMakeTool" + BuildCommandLine="cd $(ProjectDir)\build
bjam debug -q -n" + ReBuildCommandLine="cd $(ProjectDir)\build
bjam debug -a -q" + CleanCommandLine="cd $(ProjectDir)\build
bjam debug clean" + Output="" + PreprocessorDefinitions="WIN32;_DEBUG;" + IncludeSearchPath=""C:\Boost\include\boost-1_34_1"" + ForcedIncludes="" + AssemblySearchPath="" + ForcedUsingAssemblies="" + CompileAsManaged="" + /> + </Configuration> + <Configuration + Name="Release|Win32" + OutputDirectory="Release" + IntermediateDirectory="Release" + ConfigurationType="0" + BuildLogFile="build\$(IntDir)\BuildLog.htm" + > + <Tool + Name="VCNMakeTool" + BuildCommandLine="cd $(ProjectDir)\build
bjam release -q" + ReBuildCommandLine="cd $(ProjectDir)\build
bjam release -a -q" + CleanCommandLine="cd $(ProjectDir)\build
bjam release clean -a -q" + Output="" + PreprocessorDefinitions="WIN32;NDEBUG;" + IncludeSearchPath="" + ForcedIncludes="" + AssemblySearchPath="" + ForcedUsingAssemblies="" + CompileAsManaged="" + /> + </Configuration> + </Configurations> + <References> + </References> + <Files> + <Filter + Name="Header Files" + Filter="h;hpp;hxx;hm;inl;inc;xsd" + UniqueIdentifier="{93995380-89BD-4b04-88EB-625FBE52EBFB}" + > + <File + RelativePath=".\utility\proteome\AminoAcid.hpp" + > + </File> + <File + RelativePath=".\pwiz\utility\proteome\AminoAcid.hpp" + > + </File> + <File + RelativePath=".\pwiz\utility\proteome\auto_vector.h" + > + </File> + <File + RelativePath=".\utility\proteome\auto_vector.h" + > + </File> + <File + RelativePath=".\utility\misc\Base64.hpp" + > + </File> + <File + RelativePath=".\pwiz\utility\misc\Base64.hpp" + > + </File> + <File + RelativePath=".\data\msdata\BinaryDataEncoder.hpp" + > + </File> + <File + RelativePath=".\pwiz\data\msdata\BinaryDataEncoder.hpp" + > + </File> + <File + RelativePath=".\pwiz\data\misc\CalibrationParameters.hpp" + > + </File> + <File + RelativePath=".\data\misc\CalibrationParameters.hpp" + > + </File> + <File + RelativePath=".\utility\proteome\Chemistry.hpp" + > + </File> + <File + RelativePath=".\pwiz\utility\proteome\Chemistry.hpp" + > + </File> + <File + RelativePath=".\pwiz\utility\proteome\ChemistryData.hpp" + > + </File> + <File + RelativePath=".\utility\proteome\ChemistryData.hpp" + > + </File> + <File + RelativePath=".\data\msdata\ChromatogramList_mzML.hpp" + > + </File> + <File + Rel... [truncated message content] |