[Obo-phenotype-commits] obo/ontology/phenotype human_disease.obo, 1.363, 1.364 mosquito_insecticide

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Update of /cvsroot/obo/obo/ontology/phenotype
In directory vz-cvs-4.sog:/tmp/cvs-serv6090/phenotype

Modified Files:
	human_disease.obo mosquito_insecticide_resistance.obo 
Log Message:
Automated file update

Index: human_disease.obo
===================================================================
RCS file: /cvsroot/obo/obo/ontology/phenotype/human_disease.obo,v
retrieving revision 1.363
retrieving revision 1.364
diff -C2 -d -r1.363 -r1.364
*** human_disease.obo	17 May 2011 07:01:57 -0000	1.363
--- human_disease.obo	18 May 2011 07:01:56 -0000	1.364
***************
*** 1,4 ****
  format-version: 1.2
! date: 16:05:2011 16:41
  auto-generated-by: OBO-Edit 2.1-beta6
  subsetdef: GOLD "GOLD"
--- 1,4 ----
  format-version: 1.2
! date: 17:05:2011 16:46
  auto-generated-by: OBO-Edit 2.1-beta6
  subsetdef: GOLD "GOLD"
***************
*** 360,364 ****
  id: DOID:0050072
  name: adiaspiromycosis
! def: "A primary systemic mycosis that is a fungal infection located_in lungs, or located_in skin, which results_in disseminated granulomatous pulmonary process and cutaneous infection in rodents, small wild mammals and humans, has_material_basis_in Chrysosporium parvum." [url:http\://www.chestjournal.org/content/97/5/1171.abstract, url:http\://www.eblue.org/article/S0190-9622%2804%2901331-3/abstract]
  is_a: DOID:0050292 ! primary systemic mycosis

--- 360,364 ----
  id: DOID:0050072
  name: adiaspiromycosis
! def: "A primary systemic mycosis that is a fungal infection located_in lungs, or located_in skin, which results_in disseminated granulomatous pulmonary process and cutaneous infection in rodents, small wild mammals and humans, has_material_basis_in Chrysosporium parvum or Emmonsia crescens." [url:http\://www.chestjournal.org/content/97/5/1171.abstract, url:http\://www.eblue.org/article/S0190-9622%2804%2901331-3/abstract]
  is_a: DOID:0050292 ! primary systemic mycosis

***************
*** 1891,1895 ****
  id: DOID:0050289
  name: fusariosis
! def: "An opportunistic mycosis that involves localized or hematogenously disseminated fungal infection by Fusarium species. Skin lesions are seen in neutropenic patients, and indolent cellulitis or soft-tissue necrosis occur in immunocompromised patients at the site of trauma." [url:http\://www.accessmedicine.com/resourceTOC.aspx?resourceID=4, url:http\://www.ncbi.nlm.nih.gov/pubmed/14748803]
  is_a: DOID:2473 ! opportunistic mycosis

--- 1891,1895 ----
  id: DOID:0050289
  name: fusariosis
! def: "An opportunistic mycosis that involves localized or hematogenously disseminated fungal infection by Fusarium solani or Fusarium oxysporum. Skin lesions are seen in neutropenic patients, and indolent cellulitis or soft-tissue necrosis occur in immunocompromised patients at the site of trauma." [url:http\://www.accessmedicine.com/resourceTOC.aspx?resourceID=4, url:http\://www.ncbi.nlm.nih.gov/pubmed/14748803]
  is_a: DOID:2473 ! opportunistic mycosis

***************
*** 16084,16088 ****
  id: DOID:11339
  name: pneumocystosis
! def: "An opportunistic mycosis that is located_in lungs, has_material_basis_in Pneumocystis jirovecii that effects interstitial and alveolar tissues and has_symptom nonproductive cough, has_symptom shortness of breath, and has_symptom fever." [url:http\://www.nlm.nih.gov/medlineplus/ency/article/000671.htm, url:http\://www2.merriam-webster.com/cgi-bin/mwmednlm?book=Medical&va=pneumocystis%20carinii%20pneumonia]
  synonym: "Pneumocystis carinii pneumonia" EXACT [SNOMEDCT_2005_07_31:155557008]
  synonym: "Pneumocystis jirovecii pneumonia" EXACT []
--- 16084,16088 ----
  id: DOID:11339
  name: pneumocystosis
! def: "An opportunistic mycosis that is located_in lungs, but can also occur in eyes, ears, skin, thyroid, pituitary, palate, parathyroid, esophagus, pleura, heart, liver, spleen, small intestine, adrenals, kidneys, bone marrow, and lymph nodes, has_material_basis_in Pneumocystis jirovecii that effects interstitial and alveolar tissues and has_symptom nonproductive cough, has_symptom shortness of breath, and has_symptom fever." [url:http\://www.nlm.nih.gov/medlineplus/ency/article/000671.htm, url:http\://www2.merriam-webster.com/cgi-bin/mwmednlm?book=Medical&va=pneumocystis%20carinii%20pneumonia]
  synonym: "Pneumocystis carinii pneumonia" EXACT [SNOMEDCT_2005_07_31:155557008]
  synonym: "Pneumocystis jirovecii pneumonia" EXACT []
***************
*** 20837,20841 ****
  id: DOID:12053
  name: cryptococcosis
! def: "An opportunistic mycosis that results_in fungal infection and has_material_basis_in Cryptococcus neoformans." [url:http\://en.wikipedia.org/wiki/Cryptococcosis]
  synonym: "(Cryptococcosis [& European]) or (torula) or (Busse Buschkes disease)" EXACT [SNOMEDCT_2005_07_31:187090005]
  synonym: "Busse-Buschke's disease" EXACT [SNOMEDCT_2005_07_31:20850004]
--- 20837,20841 ----
  id: DOID:12053
  name: cryptococcosis
! def: "An opportunistic mycosis that results_in fungal infection and has_material_basis_in Cryptococcus neoformans or Cryptococcus gattii." [url:http\://en.wikipedia.org/wiki/Cryptococcosis]
  synonym: "(Cryptococcosis [& European]) or (torula) or (Busse Buschkes disease)" EXACT [SNOMEDCT_2005_07_31:187090005]
  synonym: "Busse-Buschke's disease" EXACT [SNOMEDCT_2005_07_31:20850004]
***************
*** 25401,25406 ****
  xref: NCI2009_04D:C36306
  xref: UMLS_CUI:C1334442
! is_a: DOID:12722 ! liver metastasis
! is_a: DOID:4828 ! metastatic lung carcinoma

  [Term]
--- 25401,25405 ----
  xref: NCI2009_04D:C36306
  xref: UMLS_CUI:C1334442
! is_obsolete: true

  [Term]
***************
*** 27623,27637 ****

  [Term]
- id: DOID:13075
- name: malignant neoplasm of lower lobe, bronchus or lung
- synonym: "malignant neoplasm of lower lobe, bronchus or lung (disorder)" EXACT [SNOMEDCT_2005_07_31:187868006]
- synonym: "malignant neoplasm of lower lobe, bronchus or lung NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:187871003]
- xref: ICD9CM_2010:162.5
- xref: SNOMEDCT_2010_1_31:187868006
- xref: SNOMEDCT_2010_1_31:187871003
- xref: UMLS_CUI:C0153492
- is_a: DOID:1324 ! malignant neoplasm of lung
- 
- [Term]
  id: DOID:13076
  name: abdominal actinomycosis
--- 27622,27625 ----
***************
*** 28629,28643 ****

  [Term]
- id: DOID:1322
- name: malignant neoplasm of middle lobe, bronchus or lung
- synonym: "malignant neoplasm of middle lobe, bronchus or lung (disorder)" EXACT [SNOMEDCT_2005_07_31:187864008]
- synonym: "malignant neoplasm of middle lobe, bronchus or lung NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:187867001]
- xref: ICD9CM_2010:162.4
- xref: SNOMEDCT_2010_1_31:187864008
- xref: SNOMEDCT_2010_1_31:187867001
- xref: UMLS_CUI:C0153491
- is_a: DOID:1324 ! malignant neoplasm of lung
- 
- [Term]
  id: DOID:13222
  name: submucous uterine fibroid
--- 28617,28620 ----
***************
*** 28742,28748 ****
  [Term]
  id: DOID:1324
! name: malignant neoplasm of lung
  xref: ICD9CM_2010:162.8
  xref: SNOMEDCT_2010_1_31:187874006
  xref: UMLS_CUI:C0153493
  is_a: DOID:3683 ! lung neoplasm
--- 28719,28741 ----
  [Term]
  id: DOID:1324
! name: lung cancer
! alt_id: DOID:13075
! alt_id: DOID:1322
! alt_id: DOID:9881
! xref: ICD9CM_2010:162.3
! xref: ICD9CM_2010:162.4
! xref: ICD9CM_2010:162.5
  xref: ICD9CM_2010:162.8
+ xref: SNOMEDCT_2010_1_31:187860004
+ xref: SNOMEDCT_2010_1_31:187863002
+ xref: SNOMEDCT_2010_1_31:187864008
+ xref: SNOMEDCT_2010_1_31:187867001
+ xref: SNOMEDCT_2010_1_31:187868006
+ xref: SNOMEDCT_2010_1_31:187871003
  xref: SNOMEDCT_2010_1_31:187874006
+ xref: SNOMEDCT_2010_1_31:269464000
+ xref: UMLS_CUI:C0024624
+ xref: UMLS_CUI:C0153491
+ xref: UMLS_CUI:C0153492
  xref: UMLS_CUI:C0153493
  is_a: DOID:3683 ! lung neoplasm
***************
*** 28800,28804 ****
  [Term]
  id: DOID:1325
! name: malignant neoplasm of bronchus or lung
  synonym: "malignant neoplasm of bronchus and lung, unspecified" EXACT [ICD9CM_2006:162.9]
  synonym: "malignant neoplasm of bronchus or lung NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:269465004]
--- 28793,28797 ----
  [Term]
  id: DOID:1325
! name: bronchus cancer
  synonym: "malignant neoplasm of bronchus and lung, unspecified" EXACT [ICD9CM_2006:162.9]
  synonym: "malignant neoplasm of bronchus or lung NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:269465004]
***************
*** 28809,28813 ****
  xref: SNOMEDCT_2010_1_31:269465004
  xref: UMLS_CUI:C0348343
! is_a: DOID:1324 ! malignant neoplasm of lung

  [Term]
--- 28802,28806 ----
  xref: SNOMEDCT_2010_1_31:269465004
  xref: UMLS_CUI:C0348343
! is_a: DOID:1324 ! lung cancer

  [Term]
***************
*** 34095,34099 ****
  id: DOID:14049
  name: phaeohyphomycosis
! def: "A primary systemic mycosis located_in subcutaneous tissues, located_in brain, located_in sinuses, located_in lungs, located_in peritoneal cavity and located_in bones of humans and lower animals, has_material_basis_in Exophiala, has_material_basis_in Phialophora, has_material_basis_in Bipolaris, has_material_basis_in Exserohilum, has_material_basis_in Cladophialophora, has_material_basis_in Phaeoannellomyces, has_material_basis_in Aureobasidium, has_material_basis_in Cladosporium, has_material_basis_in Curvularia or has_material_basis_in Alternaria and results_in_formation_of subcutaneous abscesses arising at the site of minor trauma, and occur in both immunosuppressed and immunocompetent individuals." [url:http\://www.doctorfungus.org/mycoses/human/other/phaeohyphomycosis.htm, url:http\://www.mycology.adelaide.edu.au/Mycoses/Subcutaneous/Phaeohyphomycosis/]
  synonym: "Infection by dematiacious fungi" EXACT [MTHICD9_2006:117.8]
  synonym: "Infection by dematiacious fungi [Phaehyphomycosis]" EXACT [ICD9CM_2006:117.8]
--- 34088,34092 ----
  id: DOID:14049
  name: phaeohyphomycosis
! def: "A primary systemic mycosis located_in subcutaneous tissues, located_in brain, located_in sinuses, located_in lungs, located_in peritoneal cavity and located_in bones of humans and lower animals, has_material_basis_in Exophiala dermatitidis, has_material_basis_in Phialophora, has_material_basis_in Bipolaris hawaiiensis, has_material_basis_in Exserohilum, has_material_basis_in Cladophialophora bantiana, has_material_basis_in Phaeoannellomyces, has_material_basis_in Aureobasidium, has_material_basis_in Cladosporium cladosporoides, has_material_basis_in Alternaria or has_material_basis_in Rhinocladiella mackenziei and results_in_formation_of subcutaneous abscesses arising at the site of minor trauma, and occur in both immunosuppressed and immunocompetent individuals." [url:http\://www.doctorfungus.org/mycoses/human/other/phaeohyphomycosis.htm, url:http\://www.mycology.adelaide.edu.au/Mycoses/Subcutaneous/Phaeohyphomycosis/, url:http\://www.thelancet.com/journals/laninf/article/PIIS1473-3099%2809%2970131-8/abstract]
  synonym: "Infection by dematiacious fungi" EXACT [MTHICD9_2006:117.8]
  synonym: "Infection by dematiacious fungi [Phaehyphomycosis]" EXACT [ICD9CM_2006:117.8]
***************
*** 42562,42566 ****
  [Term]
  id: DOID:1988
! name: rectum lymphoma 
  synonym: "Lymphoma of rectum" EXACT [NCI2004_11_17:C5553]
  xref: NCI2009_04D:C5553
--- 42555,42559 ----
  [Term]
  id: DOID:1988
! name: rectum lymphoma
  synonym: "Lymphoma of rectum" EXACT [NCI2004_11_17:C5553]
  xref: NCI2009_04D:C5553
***************
*** 44011,44015 ****
  xref: SNOMEDCT_2010_1_31:94391008
  xref: UMLS_CUI:C0153676
! is_a: DOID:1324 ! malignant neoplasm of lung

  [Term]
--- 44004,44008 ----
  xref: SNOMEDCT_2010_1_31:94391008
  xref: UMLS_CUI:C0153676
! is_obsolete: true

  [Term]
***************
*** 49963,49967 ****
  xref: NCI2009_04D:C4860
  xref: UMLS_CUI:C0598790
! is_a: DOID:1324 ! malignant neoplasm of lung

  [Term]
--- 49956,49960 ----
  xref: NCI2009_04D:C4860
  xref: UMLS_CUI:C0598790
! is_a: DOID:1324 ! lung cancer

  [Term]
***************
*** 51774,51779 ****
  xref: NCI2009_04D:C7321
  xref: UMLS_CUI:C1335166
! is_a: DOID:2394 ! ovarian cancer
! is_a: DOID:2996 ! mixed germ cell-sex cord neoplasm

  [Term]
--- 51767,51771 ----
  xref: NCI2009_04D:C7321
  xref: UMLS_CUI:C1335166
! is_obsolete: true

  [Term]
***************
*** 52824,52828 ****
  xref: UMLS_CUI:C0001420
  is_a: DOID:299 ! adenocarcinoma
- is_a: DOID:3113 ! papillary carcinoma

  [Term]
--- 52816,52819 ----
***************
*** 53456,53460 ****
  xref: SNOMEDCT_2010_1_31:189560002
  xref: UMLS_CUI:C0206720
- is_a: DOID:155 ! glandular and epithelial neoplasm
  is_a: DOID:157 ! epithelial carcinoma

--- 53447,53450 ----
***************
*** 54607,54613 ****
  xref: SNOMEDCT_2010_1_31:74751003
  xref: UMLS_CUI:C0206661
! is_a: DOID:194 ! gonadal tissue neoplasm
! is_a: DOID:2996 ! mixed germ cell-sex cord neoplasm
! is_a: DOID:3095 ! germ cell and embryonal cancer

  [Term]
--- 54597,54601 ----
  xref: SNOMEDCT_2010_1_31:74751003
  xref: UMLS_CUI:C0206661
! is_a: DOID:0060072 ! benign neoplasm

  [Term]
***************
*** 56090,56094 ****
  xref: NCI2009_04D:C5214
  xref: UMLS_CUI:C0858252
! is_a: DOID:299 ! adenocarcinoma

  [Term]
--- 56078,56082 ----
  xref: NCI2009_04D:C5214
  xref: UMLS_CUI:C0858252
! is_a: DOID:1612 ! breast cancer

  [Term]
***************
*** 57073,57077 ****
  xref: NCI2009_04D:C39985
  xref: UMLS_CUI:C1518716
- is_a: DOID:2995 ! ovarian mixed germ cell-sex cord neoplasm
  is_a: DOID:3301 ! gonadoblastoma

--- 57061,57064 ----
***************
*** 57082,57086 ****
  xref: UMLS_CUI:C1515283
  is_a: DOID:3301 ! gonadoblastoma
- is_a: DOID:3580 ! testicular mixed germ cell-sex cord-stromal neoplasm

  [Term]
--- 57069,57072 ----
***************
*** 57091,57096 ****
  xref: NCI2009_04D:C7322
  xref: UMLS_CUI:C1336719
! is_a: DOID:2996 ! mixed germ cell-sex cord neoplasm
! is_a: DOID:2998 ! testicular neoplasm

  [Term]
--- 57077,57081 ----
  xref: NCI2009_04D:C7322
  xref: UMLS_CUI:C1336719
! is_obsolete: true

  [Term]
***************
*** 59949,59953 ****
  xref: SNOMEDCT_2010_1_31:269561006
  xref: UMLS_CUI:C0684249
! is_a: DOID:305 ! carcinoma

  [Term]
--- 59934,59938 ----
  xref: SNOMEDCT_2010_1_31:269561006
  xref: UMLS_CUI:C0684249
! is_a: DOID:1324 ! lung cancer

  [Term]
***************
*** 62888,62892 ****
  id: DOID:4270
  name: encephalitozoonosis
! def: "A microsporidiosis that is_a zoonotic infectious disease results_in disseminated fungal infection in dogs, cats, hamsters, guinea pigs, rats, mice and humans, has_material_basis_in Encephalitozoon cuniculi, has_material_basis_in Encephalitozoon cuniculi, or has_material_basis_in Encephalitozoon hellem." [url:http\://jvdi.org/cgi/reprint/5/4/649.pdf, url:http\://www.petplace.com/dogs/encephalitozoonosis/page1.aspx]
  subset: zoonotic_infectious_disease
  synonym: "Infection by Encephalitozoon (disorder)" EXACT [SNOMEDCT_2005_07_31:12825006]
--- 62873,62877 ----
  id: DOID:4270
  name: encephalitozoonosis
! def: "A microsporidiosis that is a zoonotic infectious disease results_in disseminated fungal infection in dogs, cats, hamsters, guinea pigs, rats, mice and humans, has_material_basis_in Encephalitozoon cuniculi, has_material_basis_in Encephalitozoon intestinalis or has_material_basis_in Encephalitozoon hellem." [url:http\://jvdi.org/cgi/reprint/5/4/649.pdf, url:http\://www.petplace.com/dogs/encephalitozoonosis/page1.aspx]
  subset: zoonotic_infectious_disease
  synonym: "Infection by Encephalitozoon (disorder)" EXACT [SNOMEDCT_2005_07_31:12825006]
***************
*** 65276,65280 ****
  [Term]
  id: DOID:4556
! name: large cell carcinoma of lung
  synonym: "large cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254629004]
  synonym: "large cell lung carcinoma" EXACT [NCI2004_11_17:C4450]
--- 65261,65265 ----
  [Term]
  id: DOID:4556
! name: lung large cell carcinoma
  synonym: "large cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254629004]
  synonym: "large cell lung carcinoma" EXACT [NCI2004_11_17:C4450]
***************
*** 65283,65287 ****
  xref: UMLS_CUI:C0345958
  is_a: DOID:3908 ! non-small cell lung carcinoma
- is_a: DOID:4552 ! large cell carcinoma

  [Term]
--- 65268,65271 ----
***************
*** 66893,66897 ****
  xref: SNOMEDCT_2010_1_31:43149009
  xref: UMLS_CUI:C0206629
! is_a: DOID:1324 ! malignant neoplasm of lung
  is_a: DOID:4766 ! embryoma

--- 66877,66881 ----
  xref: SNOMEDCT_2010_1_31:43149009
  xref: UMLS_CUI:C0206629
! is_a: DOID:1324 ! lung cancer
  is_a: DOID:4766 ! embryoma

***************
*** 67352,67356 ****
  xref: NCI2009_04D:C8774
  xref: UMLS_CUI:C0855005
! is_a: DOID:3905 ! lung carcinoma

  [Term]
--- 67336,67340 ----
  xref: NCI2009_04D:C8774
  xref: UMLS_CUI:C0855005
! is_obsolete: true

  [Term]
***************
*** 67410,67415 ****
  xref: NCI2009_04D:C7783
  xref: UMLS_CUI:C0278517
! is_a: DOID:3908 ! non-small cell lung carcinoma
! is_a: DOID:4833 ! recurrent lung carcinoma

  [Term]
--- 67394,67398 ----
  xref: NCI2009_04D:C7783
  xref: UMLS_CUI:C0278517
! is_obsolete: true

  [Term]
***************
*** 67419,67423 ****
  xref: NCI2009_04D:C8953
  xref: UMLS_CUI:C0855002
! is_a: DOID:3905 ! lung carcinoma

  [Term]
--- 67402,67406 ----
  xref: NCI2009_04D:C8953
  xref: UMLS_CUI:C0855002
! is_obsolete: true

  [Term]
***************
*** 71299,71304 ****
  xref: UMLS_CUI:C1512224
  is_a: DOID:3458 ! breast adenocarcinoma
- is_a: DOID:4468 ! clear cell adenocarcinoma
- is_a: DOID:5311 ! glycogen-rich carcinoma

  [Term]
--- 71282,71285 ----
***************
*** 73802,73806 ****
  [Term]
  id: DOID:5584
! name: giant cell carcinoma of lung
  synonym: "Giant cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254631008]
  synonym: "Giant cell lung carcinoma" EXACT [NCI2004_11_17:C4452]
--- 73783,73787 ----
  [Term]
  id: DOID:5584
! name: lung giant cell carcinoma
  synonym: "Giant cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254631008]
  synonym: "Giant cell lung carcinoma" EXACT [NCI2004_11_17:C4452]
***************
*** 73808,73813 ****
  xref: SNOMEDCT_2010_1_31:254631008
  xref: UMLS_CUI:C0345960
! is_a: DOID:4556 ! large cell carcinoma of lung
! is_a: DOID:5583 ! giant cell carcinoma

  [Term]
--- 73789,73793 ----
  xref: SNOMEDCT_2010_1_31:254631008
  xref: UMLS_CUI:C0345960
! is_a: DOID:4556 ! lung large cell carcinoma

  [Term]
***************
*** 73838,73846 ****
  [Term]
  id: DOID:5588
! name: papillary adenocarcinoma of lung
  synonym: "Papillary adenocarcinoma of the lung" EXACT [NCI2004_11_17:C5650]
  xref: NCI2009_04D:C5650
  xref: UMLS_CUI:C1335325
- is_a: DOID:3112 ! papillary adenocarcinoma
  is_a: DOID:3910 ! lung adenocarcinoma

--- 73818,73825 ----
  [Term]
  id: DOID:5588
! name: lung papillary adenocarcinoma
  synonym: "Papillary adenocarcinoma of the lung" EXACT [NCI2004_11_17:C5650]
  xref: NCI2009_04D:C5650
  xref: UMLS_CUI:C1335325
  is_a: DOID:3910 ! lung adenocarcinoma

***************
*** 76729,76734 ****
  xref: NCI2009_04D:C36304
  xref: UMLS_CUI:C1334441
! is_a: DOID:4828 ! metastatic lung carcinoma
! is_a: DOID:927 ! metastatic malignant neoplasm to brain

  [Term]
--- 76708,76712 ----
  xref: NCI2009_04D:C36304
  xref: UMLS_CUI:C1334441
! is_obsolete: true

  [Term]
***************
*** 78097,78101 ****
  [Term]
  id: DOID:6190
! name: rectum Kaposi's sarcoma 
  def: "A sarcoma of the rectum that results_in lesions that are located_in the rectum." [url:http\://www.cancer.org/docroot/cri/content/cri_2_4_3x_how_is_kaposis_sarcoma_diagnosed_21.asp]
  synonym: "Kaposi's sarcoma of rectum" EXACT [NCI2004_11_17:C5550]
--- 78075,78079 ----
  [Term]
  id: DOID:6190
! name: rectum Kaposi's sarcoma
  def: "A sarcoma of the rectum that results_in lesions that are located_in the rectum." [url:http\://www.cancer.org/docroot/cri/content/cri_2_4_3x_how_is_kaposis_sarcoma_diagnosed_21.asp]
  synonym: "Kaposi's sarcoma of rectum" EXACT [NCI2004_11_17:C5550]
***************
*** 79794,79798 ****
  [Term]
  id: DOID:6482
! name: acinar adenocarcinoma of lung
  synonym: "acinar adenocarcinoma of the lung" EXACT [NCI2004_11_17:C5649]
  xref: NCI2009_04D:C5649
--- 79772,79776 ----
  [Term]
  id: DOID:6482
! name: lung acinar adenocarcinoma
  synonym: "acinar adenocarcinoma of the lung" EXACT [NCI2004_11_17:C5649]
  xref: NCI2009_04D:C5649
***************
*** 80874,80878 ****
  xref: NCI2009_04D:C5672
  xref: UMLS_CUI:C1334363
! is_a: DOID:4556 ! large cell carcinoma of lung
  is_a: DOID:5410 ! neuroendocrine neoplasm of lung
  is_a: DOID:5721 ! large-cell neuroendocrine carcinoma
--- 80852,80856 ----
  xref: NCI2009_04D:C5672
  xref: UMLS_CUI:C1334363
! is_a: DOID:4556 ! lung large cell carcinoma
  is_a: DOID:5410 ! neuroendocrine neoplasm of lung
  is_a: DOID:5721 ! large-cell neuroendocrine carcinoma
***************
*** 81569,81573 ****
  xref: UMLS_CUI:C0519063
  is_a: DOID:0060058 ! lymphoma
! is_a: DOID:1324 ! malignant neoplasm of lung

  [Term]
--- 81547,81551 ----
  xref: UMLS_CUI:C0519063
  is_a: DOID:0060058 ! lymphoma
! is_a: DOID:1324 ! lung cancer

  [Term]
***************
*** 83903,83907 ****
  xref: NCI2009_04D:C6685
  xref: UMLS_CUI:C1335095
! is_a: DOID:4556 ! large cell carcinoma of lung
  is_a: DOID:4818 ! lung occult non-small cell carcinoma

--- 83881,83885 ----
  xref: NCI2009_04D:C6685
  xref: UMLS_CUI:C1335095
! is_a: DOID:4556 ! lung large cell carcinoma
  is_a: DOID:4818 ! lung occult non-small cell carcinoma

***************
*** 84425,84433 ****
  [Term]
  id: DOID:7267
! name: clear cell carcinoma of lung
  xref: SNOMEDCT_2010_1_31:254630009
  xref: UMLS_CUI:C0345959
  is_a: DOID:3910 ! lung adenocarcinoma
- is_a: DOID:4556 ! large cell carcinoma of lung

  [Term]
--- 84403,84410 ----
  [Term]
  id: DOID:7267
! name: lung clear cell carcinoma
  xref: SNOMEDCT_2010_1_31:254630009
  xref: UMLS_CUI:C0345959
  is_a: DOID:3910 ! lung adenocarcinoma

  [Term]
***************
*** 85550,85554 ****
  xref: SNOMEDCT_2010_1_31:128629005
  xref: UMLS_CUI:C1265997
! is_a: DOID:4556 ! large cell carcinoma of lung

  [Term]
--- 85527,85531 ----
  xref: SNOMEDCT_2010_1_31:128629005
  xref: UMLS_CUI:C1265997
! is_a: DOID:4556 ! lung large cell carcinoma

  [Term]
***************
*** 86953,86963 ****
  [Term]
  id: DOID:7696
! name: malignant neoplasm of hilus of lung
  synonym: "malignant tumor of lung Hilum" EXACT [NCI2004_11_17:C4566]
  synonym: "primary malignant neoplasm of hilus of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:93827000]
  xref: SNOMEDCT_2010_1_31:93827000
  xref: UMLS_CUI:C0346601
! is_a: DOID:1324 ! malignant neoplasm of lung
! is_a: DOID:5767 ! hilar lung neoplasm

  [Term]
--- 86930,86939 ----
  [Term]
  id: DOID:7696
! name: lung hilum cancer
  synonym: "malignant tumor of lung Hilum" EXACT [NCI2004_11_17:C4566]
  synonym: "primary malignant neoplasm of hilus of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:93827000]
  xref: SNOMEDCT_2010_1_31:93827000
  xref: UMLS_CUI:C0346601
! is_a: DOID:1324 ! lung cancer

  [Term]
***************
*** 88410,88414 ****
  xref: SNOMEDCT_2010_1_31:80367008
  xref: UMLS_CUI:C0549471
! is_a: DOID:1324 ! malignant neoplasm of lung
  is_a: DOID:5762 ! pulmonary sulcus tumor

--- 88386,88390 ----
  xref: SNOMEDCT_2010_1_31:80367008
  xref: UMLS_CUI:C0549471
! is_a: DOID:1324 ! lung cancer
  is_a: DOID:5762 ! pulmonary sulcus tumor

***************
*** 89470,89474 ****
  xref: UMLS_CUI:C1334445
  is_a: DOID:3905 ! lung carcinoma
! is_a: DOID:7696 ! malignant neoplasm of hilus of lung

  [Term]
--- 89446,89450 ----
  xref: UMLS_CUI:C1334445
  is_a: DOID:3905 ! lung carcinoma
! is_a: DOID:7696 ! lung hilum cancer

  [Term]
***************
*** 102465,102478 ****

  [Term]
- id: DOID:9881
- name: malignant neoplasm of upper lobe, bronchus or lung
- xref: ICD9CM_2010:162.3
- xref: SNOMEDCT_2010_1_31:187860004
- xref: SNOMEDCT_2010_1_31:187863002
- xref: SNOMEDCT_2010_1_31:269464000
- xref: UMLS_CUI:C0024624
- is_a: DOID:1324 ! malignant neoplasm of lung
- 
- [Term]
  id: DOID:9883
  name: Becker muscular dystrophy
--- 102441,102444 ----

[Obo-phenotype-commits] obo/ontology/phenotype human_disease.obo, 1.363, 1.364 mosquito_insecticide

[Obo-phenotype-commits] obo/ontology/phenotype human_disease.obo, 1.363, 1.364 mosquito_insecticide_resistance.obo, 1.1081, 1.1082