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MUMmer is a modular system for the rapid whole genome alignment of finished or draft sequence. This package provides an efficient suffix tree library, seed-and-extend alignment, SNP detection, repeat detection, and visualization tools.
percent identity plot (bot) compared with gene models (top)
percent-identity color coded dotplot of a promer alignment
unordered multiplot of finished vs. draft sequence alignment
ordered and oriented multiplot of finished vs. draft seqs
Project Members:
- Adam Phillippy (admin)
- Alejandro Hernandez Wences
- Art. Delcher (admin)
- Brian Ondov
- Michael Schatz (admin)
- Mihai Pop (admin)
- Todd Treangen
- salzberg (admin)