[Metware-commits] SF.net SVN: metware:[1010] mzAnnot/trunk/examples/psicvExample.cml

[<eg...@us...>]

Revision: 1010
          http://metware.svn.sourceforge.net/metware/?rev=1010&view=rev
Author:   egonw
Date:     2009-12-02 16:39:45 +0000 (Wed, 02 Dec 2009)

Log Message:
-----------
Fixed PSI CV example.

* <metadata> @title instead @name which is reserved for an existing
  CML-based controlled vocabulary
* defined namespaces for PSI MS and OBO units
* added @convention attributes (as example; not final)
* wrapped the metadata in a <metadataList>

Modified Paths:
--------------
    mzAnnot/trunk/examples/psicvExample.cml

Modified: mzAnnot/trunk/examples/psicvExample.cml
===================================================================
--- mzAnnot/trunk/examples/psicvExample.cml	2009-12-02 16:23:49 UTC (rev 1009)
+++ mzAnnot/trunk/examples/psicvExample.cml	2009-12-02 16:39:45 UTC (rev 1010)
@@ -1,10 +1,12 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <cml xmlns="http://www.xml-cml.org/schema"
-     cvRef:MS="http://psidev.cvs.sourceforge.net/*checkout*/psidev/psi/psi-ms/mzML/controlledVocabulary/psi-ms.obo dict/psims.xml"
-     cvRef:UO="http://obo.cvs.sourceforge.net/*checkout*/obo/obo/ontology/phenotype/unit.obo dict/unit.xml">
+     xmlns:psims="http://psidev.cvs.sourceforge.net/*checkout*/psidev/psi/psi-ms/mzML/controlledVocabulary/psi-ms.obo"
+     xmlns:unit="http://obo.cvs.sourceforge.net/*checkout*/obo/obo/ontology/phenotype/unit.obo">
 
-<metadata dictRef="cvRef:MS" id="MS:1000569" name="SHA-1">1234567890123456</metadata>
-<metadata dictRef="cvRef:MS" id="MS:1000569" name="SHA-1" content="1234567890123456"/>
-<metadata dictRef="cvRef:MS" id="MS:1000130" name="positive scan"/>
+<metadataList convention="mzAnnot:PSI_MS">
+  <metadata dictRef="psi:MS_1000569" title="SHA-1">1234567890123456</metadata>
+  <metadata dictRef="psi:MS_1000569" title="SHA-1" content="1234567890123456"/>
+  <metadata dictRef="psi:MS_1000130" title="positive scan"/>
+</metadataList>
 
 </cml>
\ No newline at end of file


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