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Re: [Matplotlib-users] All kinds of issues inslalling basemap under Ubuntu 8.10 64bit [SEC=UNCLASSIFIED]
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From: Jeff W. <js...@fa...> - 2009-01-07 16:18:10
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Scott Collis wrote: > Greetings... > I have been using basemap extensively to do presentation graphics > under quite a wide variety of platforms but I got a new 64bit dual > core laptop recently and have been having all kinds of problems > installing it... > I am using (K)ubuntu 8.10 and have tried to install it two ways... > This is a 64bit system > (1) using the pre-compiles libgeos 3.0.0: > this is installed using the libgeos-dev package under ubuntu > The package (seems) to install ok > I then grab the latest source and do the usual python setup.py build jobbo > and get a massive raft of errors eg: > ...... > src/_proj.c:2353: error: ‘__pyx_kp_4’ undeclared here (not in a function) > src/_proj.c:2353: warning: excess elements in struct initializer > src/_proj.c:2353: warning: (near initialization for > ‘__pyx_string_tab[19]’) > src/_proj.c:2353: warning: excess elements in struct initializer > src/_proj.c:2353: warning: (near initialization for > ‘__pyx_string_tab[19]’) > src/_proj.c:2353: warning: excess elements in struct initializer > .. > .. > src/_proj.c:3155: error: expected ‘)’ before ‘*’ token > src/_proj.c:3170: error: expected ‘)’ before ‘*’ token > src/_proj.c:3185: error: expected ‘)’ before ‘*’ token > src/_proj.c:3200: error: expected ‘)’ before ‘*’ token > src/_proj.c:3215: error: expected ‘)’ before ‘*’ token > src/_proj.c:3230: error: expected ‘)’ before ‘*’ token > error: Command "gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv > -O2 -Wall -Wstrict-prototypes -fPIC -Isrc > -I/usr/lib/python2.5/site-packages/numpy/core/include > -I/usr/include/python2.5 -c src/_proj.c -o > build/temp.linux-x86_64-2.5/src/_proj.o" failed with exit status 1 > (2) building libgeos from source... > I get the same error for 2.2.3 (a version I have had no problems > compiling on centos5 64bit machines in the past) and 3.0.0 > make[3]: Entering directory > `/home/scollis/geos-3.0.0/source/index/quadtree' > if /bin/bash ../../../libtool --tag=CXX --mode=compile g++ > -DHAVE_CONFIG_H -I. -I. -I../../../source/headers > -I../../../source/headers/geos -I../../../source/headers -g -O2 > -DGEOS_INLINE -Wall -ansi -pedantic -Wno-long-long -MT DoubleBits.lo > -MD -MP -MF ".deps/DoubleBits.Tpo" -c -o DoubleBits.lo DoubleBits.cpp; \ > then mv -f ".deps/DoubleBits.Tpo" ".deps/DoubleBits.Plo"; else rm -f > ".deps/DoubleBits.Tpo"; exit 1; fi > g++ -DHAVE_CONFIG_H -I. -I. -I../../../source/headers > -I../../../source/headers/geos -I../../../source/headers -g -O2 > -DGEOS_INLINE -Wall -ansi -pedantic -Wno-long-long -MT DoubleBits.lo > -MD -MP -MF .deps/DoubleBits.Tpo -c DoubleBits.cpp -fPIC -DPIC -o > .libs/DoubleBits.o > DoubleBits.cpp: In static member function 'static double > geos::index::quadtree::DoubleBits::powerOf2(int)': > DoubleBits.cpp:51: error: 'memcpy' was not declared in this scope > DoubleBits.cpp: In constructor > 'geos::index::quadtree::DoubleBits::DoubleBits(double)': > DoubleBits.cpp:94: error: 'memcpy' was not declared in this scope > make[3]: *** [DoubleBits.lo] Error 1 > make[3]: Leaving directory > `/home/scollis/geos-3.0.0/source/index/quadtree' > make[2]: *** [all-recursive] Error 1 > make[2]: Leaving directory `/home/scollis/geos-3.0.0/source/index' > make[1]: *** [all-recursive] Error 1 > make[1]: Leaving directory `/home/scollis/geos-3.0.0/source' > make: *** [all-recursive] Error 1 > ANY help very very very welcome! I am some what at a loss as I have > managed to compile both libgeos and basemap under much more "user > unfriendly" distros before... Scott: Could you try this modification to DoubleBits.cpp and let me know if it fixes the geos-2.2.3 compilation? I think you must be using gcc 4.3, which is much pickier than earlier versions about such things. Index: source/index/quadtree/DoubleBits.cpp =================================================================== --- source/index/quadtree/DoubleBits.cpp (revision 6729) +++ source/index/quadtree/DoubleBits.cpp (working copy) @@ -15,6 +15,7 @@ #include <geos/indexQuadtree.h> #include <geos/util.h> +#include <string> #include <cstring> Thanks, -Jeff > Dr Scott Collis > Postdoctoral Researcher > Centre for Australian Weather and Climate Research (CAWCR) > Atmosphere and Land Observation and Assessment Group > Australian Bureau of Meteorology Room 9.57 Level 9 700 Collins Street > Docklands 3008 > Office: (03) 9669 4766 > MB: 0412177550 > http://www.bom.gov.au/bmrc/wefor/staff/scollis/ > ------------------------------------------------------------------------ > > ------------------------------------------------------------------------------ > Check out the new SourceForge.net Marketplace. > It is the best place to buy or sell services for > just about anything Open Source. > http://p.sf.net/sfu/Xq1LFB > ------------------------------------------------------------------------ > > _______________________________________________ > Matplotlib-users mailing list > Mat...@li... > https://lists.sourceforge.net/lists/listinfo/matplotlib-users > -- Jeffrey S. Whitaker Phone : (303)497-6313 Meteorologist FAX : (303)497-6449 NOAA/OAR/PSD R/PSD1 Email : Jef...@no... 325 Broadway Office : Skaggs Research Cntr 1D-113 Boulder, CO, USA 80303-3328 Web : http://tinyurl.com/5telg |