[Matplotlib-users] matplotlib._ns_transforms.so: undefined symbol: _ZNSs4_Rep20_S_empty_rep_storageE

[Khare, R. <Ris...@fa...>]

Hi All,

        I am using matplotlib-0.90.0 with numpy-1.0.1 for my python
program which I later convert in to an executable with the help of
pyinstaller,

I am installing matplotlib-0.90.0 from source and it installs fine.when
I create the executable of my program (I include matplotlib as a .pkg in
it) and run it

I get the following error only on linux , it fails at with this message

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matplotlib._ns_transforms.so: undefined symbol:
_ZNSs4_Rep20_S_empty_rep_storage

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but same set of source of matplotlib-0.90.0 with numpy-1.0.1 installed
from source works fine on windows and solaris,any idea what is going
wrong here?

I am using gcc version 3.4.3 on red hat linux 2.6.9-11

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Here is the complete stack trace

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Extracting mpl-data.pkg data ... ok

Extracting numpy.pkg data ... ok

working dir /home/rik/output/var/projects

/home/rik/are_new/exe/linux/buildare_top/out1.pyz/matplotlib:931:
UserWarning: Could not find matplotlibrc; using defaults

/home/rik/are_new/exe/linux/buildare_top/out1.pyz/matplotlib:982:
UserWarning: could not find rc file; returning defaults

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The import of the numpy version of the _transforms module,

_ns_transforms, failed.  This is is either because numpy was

unavailable when matplotlib was compiled, because a dependency of

_ns_transforms could not be satisfied, or because the build flag for

this module was turned off in setup.py.  If it appears that

_ns_transforms was not built, make sure you have a working copy of

numpy and then re-install matplotlib. Otherwise, the following

traceback gives more details:

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Traceback (most recent call last):

  File "/home/rik/are_new/exe/linux/buildare_top/out1.pyz/exe_harness",
line 97, in __init__

  File "<string>", line 69, in dispatch

  File "<string>", line 109, in handleReportRequest

  File "/home/rik/pyinstaller-1.3/iu.py", line 312, in importHook

    mod =3D _self_doimport(nm, ctx, fqname)

  File "/home/rik/pyinstaller-1.3/iu.py", line 398, in doimport

    exec co in mod.__dict__

  File "/home/rik/are_new/exe/linux/buildare_top/out1.pyz/convert_dom",
line 12, in ?

  File "/home/rik/pyinstaller-1.3/iu.py", line 312, in importHook

    mod =3D _self_doimport(nm, ctx, fqname)

  File "/home/rik/pyinstaller-1.3/iu.py", line 398, in doimport

    exec co in mod.__dict__

  File "/home/rik/are_new/exe/linux/buildare_top/out1.pyz/report", line
29, in ?

  File "/home/rik/pyinstaller-1.3/iu.py", line 312, in importHook

    mod =3D _self_doimport(nm, ctx, fqname)

  File "/home/rik/pyinstaller-1.3/iu.py", line 398, in doimport

    exec co in mod.__dict__

  File "/home/rik/are_new/exe/linux/buildare_top/out1.pyz/page_setup",
line 14, in ?

  File "/home/rik/pyinstaller-1.3/iu.py", line 312, in importHook

    mod =3D _self_doimport(nm, ctx, fqname)

  File "/home/rik/pyinstaller-1.3/iu.py", line 398, in doimport

    exec co in mod.__dict__

  File "/home/rik/are_new/exe/linux/buildare_top/out1.pyz/graph_view",
line 11, in ?

  File "/home/rik/pyinstaller-1.3/iu.py", line 312, in importHook

    mod =3D _self_doimport(nm, ctx, fqname)

  File "/home/rik/pyinstaller-1.3/iu.py", line 398, in doimport

    exec co in mod.__dict__

  File "/home/rik/are_new/exe/linux/buildare_top/out1.pyz/pylab", line
1, in ?

  File "/home/rik/pyinstaller-1.3/iu.py", line 312, in importHook

    mod =3D _self_doimport(nm, ctx, fqname)

  File "/home/rik/pyinstaller-1.3/iu.py", line 398, in doimport

    exec co in mod.__dict__

  File
"/home/rik/are_new/exe/linux/buildare_top/out1.pyz/matplotlib.pylab",
line 203, in ?

  File "/home/rik/pyinstaller-1.3/iu.py", line 312, in importHook

    mod =3D _self_doimport(nm, ctx, fqname)

  File "/home/rik/pyinstaller-1.3/iu.py", line 398, in doimport

    exec co in mod.__dict__

  File
"/home/rik/are_new/exe/linux/buildare_top/out1.pyz/matplotlib.axes",
line 14, in ?

  File "/home/rik/pyinstaller-1.3/iu.py", line 312, in importHook

    mod =3D _self_doimport(nm, ctx, fqname)

  File "/home/rik/pyinstaller-1.3/iu.py", line 398, in doimport

    exec co in mod.__dict__

  File
"/home/rik/are_new/exe/linux/buildare_top/out1.pyz/matplotlib.artist",
line 4, in ?

  File "/home/rik/pyinstaller-1.3/iu.py", line 312, in importHook

    mod =3D _self_doimport(nm, ctx, fqname)

  File "/home/rik/pyinstaller-1.3/iu.py", line 398, in doimport

    exec co in mod.__dict__

  File
"/home/rik/are_new/exe/linux/buildare_top/out1.pyz/matplotlib.transforms
", line 223, in ?

  File "/home/rik/pyinstaller-1.3/iu.py", line 312, in importHook

    mod =3D _self_doimport(nm, ctx, fqname)

  File "/home/rik/pyinstaller-1.3/iu.py", line 398, in doimport

    exec co in mod.__dict__

  File
"/home/rik/are_new/exe/linux/buildare_top/out1.pyz/matplotlib._transform
s", line 17, in ?

  File "/home/rik/pyinstaller-1.3/iu.py", line 312, in importHook

    mod =3D _self_doimport(nm, ctx, fqname)

  File "/home/rik/pyinstaller-1.3/iu.py", line 373, in doimport

    mod =3D importfunc(nm)

  File "/home/rik/pyinstaller-1.3/iu.py", line 215, in getmod

    mod =3D owner.getmod(nm)

  File "/home/rik/pyinstaller-1.3/archive.py", line 409, in getmod

    return iu.DirOwner.getmod(self, self.prefix+'.'+nm)

  File "/home/rik/pyinstaller-1.3/iu.py", line 77, in getmod

    mod =3D imp.load_module(nm, fp, attempt, (ext, mode, typ))

ImportError: /tmp/_MEI22558/matplotlib._ns_transforms.so: undefined
symbol: _ZNSs4_Rep20_S_empty_rep_storageE

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Regards

Rishi


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