[Marsbar-users] timecourse extraction in batch mode

[<da...@co...>]

Hello,

I saw that my previous email didn't display correctly, so I'm sending  
it again.

I'm trying to extract timecourses without an SPM.mat file that have  
'session specific scaling' or 'proportional scaling' [to use the  
terminology of the GUI menu "Extract ROI data (full options)"]. The  
Marsbar website explains how to get raw timecourses but I couldn't  
find anything on the website or in get_marsy.m that hints on how to  
get scaled data. How can I get scaled timecourses in batch mode?

Also, I cannot find any information on whether or not there is any  
difference between using an SPM design when extracting timecourses and  
selecting the .nii files directly. Can you explain?

Thanks,
Dobromir

-- 
Dobromir Rahnev
Columbia University
Department of Psychology
406 Schermerhorn Hall
1190 Amsterdam Ave, MC 5501
New York, NY 10027
212-854-7169