Re: [Jmol-users] mmCIF - higher numbers refused as chain ids

[Robert H. <ha...@st...>]

how unusual! I will look into it. Definitely a bug. I can't imagine why it
is doing that....

On Mon, Apr 20, 2015 at 8:42 AM, Rolf Huehne <rh...@fl...> wrote:

> Hi all,
>
> the mmCIF format generally allows multicharacter chain ids. This should
> also include numeric characters.
> But Jmol 14.3.13_2015.04.17 seems to refuse to load multicharacter chain
> ids if they consist only of numerical characters.
>
> I tried to load an mmCIF file with several thousand chains numbered
> sequentially. But only chain id 1 to 9 were accepted. All other chain
> ids (_atom_site.auth_asym_id) were refused and the id left empty.
>
> ---- mmCIF columns -------
> loop_
> _atom_site.group_PDB
> _atom_site.id
> _atom_site.type_symbol
> _atom_site.label_alt_id
> _atom_site.pdbx_PDB_ins_code
> _atom_site.Cartn_x
> _atom_site.Cartn_y
> _atom_site.Cartn_z
> _atom_site.auth_seq_id
> _atom_site.auth_comp_id
> _atom_site.auth_asym_id
> _atom_site.auth_atom_id
> --------------------------
>
> Q: Is this intended or a bug?
>
> Regards,
> Rolf
>
> --
>
> Rolf Huehne
> Postdoc
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-- 
Robert M. Hanson
Larson-Anderson Professor of Chemistry
Chair, Department of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900